| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0651 |
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| Symbol | trmD |
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| ID | 6989106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 723697 |
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| End bp | 724446 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643379046 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_002262170 |
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| Protein GI | 209694242 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.446061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGGTTG GGGTTATAAG CCTATTTCCT GAAATGTTCC GTTCGGTTAC CGATTTTGGG
GTAACTAGCC AAGCAATTAA AAAAGGTCTT TTATCTATAG AGACATGGAA TCCTAGAGAT
TTCACTCAAG ATAAACATCG CACTGTTGAT GACCGACCTT ATGGTGGTGG TCCTGGTATG
TTAATGATGG TACAGCCTTT GCGCGATGCC ATTACTGCAG CCAGAGAAGC CGCTCCAGGC
AAAACGAAAG TGATTTACCT TTCACCTCAA GGCAGAACGC TGAATCAAGC TGGTGTTGAG
GAGTTGGCAA CAAACGAGAA CTTAGTTCTT ATCTGTGGCC GATACGAAGG CGTAGATGAG
CGCATAATAC AATCTGAAGT TGACGAAGAA TGGTCAATTG GCGATTTTGT GCTTACAGGC
GGGGAACTCC CTGCTATGAC GTTGATTGAT TCTGTCTCTC GGTTTGTTCC GGGTGTACTT
GGAGATTTTG CGTCCGCTGA AGAAGATTCT TTTGCAGACG GTTTGTTAGA TTGTCCGCAC
TATACAAGGC CTGAGGTCTT GGATGGTAAG GAAGTGCCTA GTGTACTTAA ATCTGGAAAT
CATAAAGATA TCGCTCGTTG GCGAATGAAA CAATCGTTAG GCCGTACTTG GCTAAGAAGA
CCAGAGCTCC TGGGAAATCT AGCTCTGACT GACGAACAGG AATTATTACT GGCTGAATTT
GTTCGTGAAG AACATCAGCA AAGTAAGTAA
|
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| Protein sequence | MWVGVISLFP EMFRSVTDFG VTSQAIKKGL LSIETWNPRD FTQDKHRTVD DRPYGGGPGM
LMMVQPLRDA ITAAREAAPG KTKVIYLSPQ GRTLNQAGVE ELATNENLVL ICGRYEGVDE
RIIQSEVDEE WSIGDFVLTG GELPAMTLID SVSRFVPGVL GDFASAEEDS FADGLLDCPH
YTRPEVLDGK EVPSVLKSGN HKDIARWRMK QSLGRTWLRR PELLGNLALT DEQELLLAEF
VREEHQQSK
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