| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0649 |
|---|
| Symbol | rpsP |
|---|
| ID | 6988494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 722830 |
|---|
| End bp | 723120 |
|---|
| Gene Length | 291 bp |
|---|
| Protein Length | 96 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643379044 |
|---|
| Product | 30S ribosomal protein S16 |
|---|
| Protein accession | YP_002262168 |
|---|
| Protein GI | 209694240 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0228] Ribosomal protein S16 |
|---|
| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0268123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCCAAT TTAATTTTTG TACGAAGCAA ATAGAGGACG ATATGGTTAC CATTCGTTTG
GCACGTCACG GCGCGAAGAA GCGTCCATTT TATCAAATCG TAGTAGCGGA CAGCCGTTTT
AAATCAACTG GTCGTTACAT TGAGAAAGTA GGTTTCTTTA ACCCTACAGC ACAAGGTCAA
GAAGAAGGTC TTCGTTTAGA TCTTGACCGC GTTAACCATT GGGTTGGTTT AGGCGCTGGT
CTTTCTGATC GTGTAGCTAA GCTAGTTAAA GACGCTAACA AAGCGGCTTA A
|
|---|
| Protein sequence | MSQFNFCTKQ IEDDMVTIRL ARHGAKKRPF YQIVVADSRF KSTGRYIEKV GFFNPTAQGQ
EEGLRLDLDR VNHWVGLGAG LSDRVAKLVK DANKAA
|
|---|
| |