| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0629 |
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| Symbol | codA |
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| ID | 6986574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 694165 |
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| End bp | 695442 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643379016 |
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| Product | cytosine deaminase |
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| Protein accession | YP_002262148 |
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| Protein GI | 209694220 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00419836 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGATT TATTAATTAA AAATATCGCA CTACGAGATC AAGAAGGTTT ATTCCAAATC
TTGATTCAAG ATGGTCAATT TACAGCCATT GCTAACAACC ATGAAGAACT GTCTTTTTCA
GGGGATATTT TAGATGCTGA AGGTGGATTA GCGAATGCCC CTTTCTGTGA GCCCCATGTT
CATTTGGATA CGACTCAAAC CGCAGGCGAA CCAAGCTGGA ATATCTCGGG TACCCTTTTT
GAAGGTATAG AACGTTGGTC TGAGCGTAAG AAACTTCTCA CTGTTGACGA TGTTAAAAGC
CGTGCGAAAC AGACATTAAA ATGGCAAATA GCTAACGGTA TTCAACATGT TCGTACGCAT
GTCGATGTAT CTGATCCAAC ACTGATTGCA CTAAAAGCAA TGCTTGAAGT AAAAGAAGAG
ATGAAAGAAT GGATTGATAT CCAAATCGTC GCTTTTCCTC AAGAAGGCAT TCTTTCTTAC
CCTAATGGAA AAGCGTTATT AGAAGAAGCG GTTCAACTGG GTGCCGACGT TATTGGTGCT
ATTCCTCACT TTGAATTTAC TCGTGAGTAT GGCGTTGAAT CACTTCATTA TGTTTTCGAA
TTAGCGCAAA AATACGATCG TCTAATTGAT GTGCATTGTG ATGAAATTGA TGATGAACAA
TCTCGCTTTA TCGAAACCCT AGCCGCATTA GCTCATAAAT TTAATATGGG CGAAAAAGTA
ACGGCCAGCC ATACGACAGC TATGCATTCT TATAATGGGG CTTATGCTTC GCGTTTATTC
CGACTATTAA AAATGTCAGG CATCAACTTT GTCGCTAATC CATTAGTAAA TATTCACTTA
CAAGGTCGAT TTGATGATTA CCCTAAACGC CGTGGCATCA CACGCGTTAA AGAGATGCTT
GCAAGCGACA TTAACGTTTG TTTTGGTCAT GATGATATCT TCGACCCTTG GTATCCATTA
GGCACGGCTA ACATGCTTCA AGTTCTGCAC ATGGGACTGC ATGTATGCCA GATTATGGGC
TATGAGCAAA TCAACCAAGG CCTTGATCTT ATTAGCTACA AATCGGCAAG AACACTAAAT
ATTCAAGAAA ATTATGGTAT TGATGTAGGT AAGCCAGGTA ATTTAATTAT TCTTCCTGCT
GAAAATGGGT TTGATGCACT TCGTCGTCAA GTTCCTGTTC GTTACTCTAT CCGTCAAGGT
AAAATTATTT CAGAAACTCA ACCAGCAACG ACTACAATTA CTTTAGATAA AGCAGAGATA
GTTTCATTTA AACGTTAA
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| Protein sequence | MTDLLIKNIA LRDQEGLFQI LIQDGQFTAI ANNHEELSFS GDILDAEGGL ANAPFCEPHV
HLDTTQTAGE PSWNISGTLF EGIERWSERK KLLTVDDVKS RAKQTLKWQI ANGIQHVRTH
VDVSDPTLIA LKAMLEVKEE MKEWIDIQIV AFPQEGILSY PNGKALLEEA VQLGADVIGA
IPHFEFTREY GVESLHYVFE LAQKYDRLID VHCDEIDDEQ SRFIETLAAL AHKFNMGEKV
TASHTTAMHS YNGAYASRLF RLLKMSGINF VANPLVNIHL QGRFDDYPKR RGITRVKEML
ASDINVCFGH DDIFDPWYPL GTANMLQVLH MGLHVCQIMG YEQINQGLDL ISYKSARTLN
IQENYGIDVG KPGNLIILPA ENGFDALRRQ VPVRYSIRQG KIISETQPAT TTITLDKAEI
VSFKR
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