| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0623 |
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| Symbol | smp |
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| ID | 6988404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 685836 |
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| End bp | 686435 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643379010 |
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| Product | peripheral membrane protein |
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| Protein accession | YP_002262142 |
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| Protein GI | 209694214 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3726] Uncharacterized membrane protein affecting hemolysin expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.454122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCTTT CTCAAAATCT CATAATTAAA AGCCTGATGC TGCTCTCTCT GATCGCATTC
AGTTACTTTA TTTTAATTAA TAGTACGGTG ATCAGTGATA ATAATCAGAT CATTCAAAAT
AAACAGTTAC AAGATCTTAG TCGAACCATG ACAAGACAAG CAGCATTGTT TGCTGTCGAT
AGCATCAAAA AAGACGATCA CGAAGCCTTG CTGCAACTAA CGAATAATCT GGCAAAAGAA
AACCTTGTGT TTGATGCTAC GATTTACGAC GCGGAAGGTG GTGTACTAAG TAAAAGCAGC
AATGCGTTAA CCGCATCACA AATTACGGGC ATTAATACAC CATTATCGAT TGATGGCATC
GGTCGACAAC AATTAATCGA ACCAATAGTA AAAGACGATC GGGTATTGGG GTTTTTACGT
ATAACCTTTG AAAAGTCAAC GTTGACTGGT TTTGCGAACC ACCATTACCG TAAAAGTGAC
CGATTGATGT TTGGTATGCT TATTATAAGT CTTGTTTCAG GTATGTTTAT TATGGCAATA
CTTAAAAAAC GTGAAGATTC TAGCAAGCCT GTTACTACAC TTTTTGGCGG TAAGTCTTAA
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| Protein sequence | MMLSQNLIIK SLMLLSLIAF SYFILINSTV ISDNNQIIQN KQLQDLSRTM TRQAALFAVD
SIKKDDHEAL LQLTNNLAKE NLVFDATIYD AEGGVLSKSS NALTASQITG INTPLSIDGI
GRQQLIEPIV KDDRVLGFLR ITFEKSTLTG FANHHYRKSD RLMFGMLIIS LVSGMFIMAI
LKKREDSSKP VTTLFGGKS
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