| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0620 |
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| Symbol | deoA |
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| ID | 6988403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 682400 |
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| End bp | 683731 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643379008 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_002262140 |
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| Protein GI | 209694212 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCTAC CACAAGAGAT TATTCGTAGA AAACGCGACA ATAAAGTACT AACAACAGAA
GAAATTAACT TTTTTATTCA AGGTGTTGCA AAAAATACCG TGTCTGAAGG TCAAATTGCA
GCATTTGCAA TGGCGGTATA TTTTAATGAA ATGACGATGC CTGAACGTAT TGCATTAACG
TGTGCAATGC GTGATTCAGG AATGGTAATT GATTGGAGCC ATATGAACTT CGATGGCCCA
ATTGTTGATA AACATTCAAC CGGTGGTGTT GGTGATGTAA CCTCATTAAT GCTTGGTCCT
ATGGTGGCGG CATGTGGTGG TTATGTTCCT ATGATCTCTG GCCGTGGTTT AGGTCATACT
GGTGGCACGT TAGATAAATT GGAATCCATT GCTGGCTACA ATATTATGCC AAACAATGAT
CTTTTTGGAA AAGTAACCAA AGAAGCTGGC GTAGCTATCA TTGGTCAAAC GGGTGATTTA
GCACCGGCAG ATAAGCGTGT TTATGCCACT CGTGATGTAA CGGCAACCGT TGATAATATT
TCATTGATTA CTGCATCTAT TCTTTCTAAG AAATTAGCCG CAGGTTTAGA TTCATTAGTG
ATGGATGTAA AAGTCGGTTC AGGTGCATTT ATGCCGACTT ATGAGGCATC AGAAGAGCTG
GCTAAATCTA TCGTAGCTGT TGCTAATGGC GCGGGCACGA AGACGACCGC ATTACTGACG
GACATGAATC AAGTATTAGC CTCTACTGCG GGTAATGCAT TAGAAGTTCG TGAAGCGATT
CGTTTCCTAA CTGGCGAATA CCGTAATCCT CGTTTATATG AAGTTGCGAT GGCGCTATGT
GCTGAAATGC TTGTGATTGC GAACTTAGCA AAAGACGAAC AAGAAGCGTG TATTAAATTG
CAAGCAGTGT TAGACAACGG CAAAGCCGCA GAATGTTTTG GTAAAATGGT GTTTGGTCTT
GGTGGACCAA ATGACATTAT CGAAAATTAC GATAACCATT TAGAAACCGC GCAAATCATT
AAACCTGTAT TTGCAGACAA ATCCGGCTTT GTTAATACGA TGGATACGCG TGATTTAGGC
ATGGCAGTCG TTGGTATGGG GGGCGGTCGT CGTGTTGCTA GCGATACTAT TGATTATGCG
GTTGGGTTAA GTGATATGAT TCGTTTAGGT CAAACCGTTG ATAGCAATCA ACCATTAGCG
ATGATCCATG CTCGTAATGA AGATCAATGG CAGCAGGCTG CAGATGCAGT TAAAGCCGCT
ATCGTGATCA GCGAAGAACA ACCAGAAGCG ACACCGGAAG TTTATCGTAA AGTTCGCTCA
CAAGATGTGT AA
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| Protein sequence | MYLPQEIIRR KRDNKVLTTE EINFFIQGVA KNTVSEGQIA AFAMAVYFNE MTMPERIALT
CAMRDSGMVI DWSHMNFDGP IVDKHSTGGV GDVTSLMLGP MVAACGGYVP MISGRGLGHT
GGTLDKLESI AGYNIMPNND LFGKVTKEAG VAIIGQTGDL APADKRVYAT RDVTATVDNI
SLITASILSK KLAAGLDSLV MDVKVGSGAF MPTYEASEEL AKSIVAVANG AGTKTTALLT
DMNQVLASTA GNALEVREAI RFLTGEYRNP RLYEVAMALC AEMLVIANLA KDEQEACIKL
QAVLDNGKAA ECFGKMVFGL GGPNDIIENY DNHLETAQII KPVFADKSGF VNTMDTRDLG
MAVVGMGGGR RVASDTIDYA VGLSDMIRLG QTVDSNQPLA MIHARNEDQW QQAADAVKAA
IVISEEQPEA TPEVYRKVRS QDV
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