| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0605 |
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| Symbol | |
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| ID | 6986560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 669053 |
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| End bp | 670054 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643378993 |
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| Product | putative peptidase |
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| Protein accession | YP_002262125 |
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| Protein GI | 209694197 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTCC TCTGCCCAGC TGGTAATTTA CCTGCATTAA AAACCGCCAT TGATTGTGGT
GCTGATGCTG TTTATATCGG CTTTAAAGAC GATACAAACG CACGCCATTT TGCTGGTTTA
AATTTCACAG GTAAAAAGCT TGAGAAAGCA GTGCAATATG TTCACGATAA TAATAAGCAT
ATTCATGTCG CGCTAAATAC TTTTGCGCAC CCAGACGGCT TCAATCGCTG GACAAAAGCG
GTAGATAATG CAGCCGCAAT GGGCATTGAT GCACTTATCA TTTCAGACAT TGGTGTTTTA
GAATATGCAG CTAATACTTA CCCAGAATTA GAGCTGCATT TATCTGTTCA AGCCTCTGCA
ACAAACGTTG CTGCCATCGA TTTCTATAAA AAGAATTTCA ATATTAAACG CGTTGTCTTA
CCCCGCGTAT TATCGATTCA TCAAGTGAAG CAATTATCAC GTAACTTAAC CTCAGACGTA
GATCTTGAGG TTTTTGCTTT TGGTAGTTTA TGCATAATGT CTGAAGGGCG TTGTTATCTC
TCTTCTTATA TGACCGGTGA ATCACCAAAT ACCGTGGGTG CTTGCTCCCC TGCAAAATAC
GTTCGCTGGC AAGAAACAGA AAACGGATTA GAATCACGAT TGAATAATAT TCTGATCGAT
CGTTATGGTG AAGGTGAAAA CGCAGGCTAT CCAACGTTGT GTAAAGGCCG CTTTGATGTT
CAAGGAAAAA CATTTCACGC ATTAGAGGAG CCAACCAGTT TAAATACCCT ATCTTTGGTT
CCTGAGTTAT TTTCAGCCAA CGTCGCGTCA GTAAAAATTG AAGGTCGCCA ACGCAGCCCT
GCTTATGTTG AACAAGTAAC TCGTACATGG CGTGCAGCTA TTGATCGCTA TAAAGCAAAT
CCTGAAGGTT ATTCTGTTGA ACCTCAATGG GATGCAACAT TAGCGAATGT ATCAGAAGGC
ACACAAACTA CCCTTGGTGC TTACCATAAG AAATGGCAGT AG
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| Protein sequence | MELLCPAGNL PALKTAIDCG ADAVYIGFKD DTNARHFAGL NFTGKKLEKA VQYVHDNNKH
IHVALNTFAH PDGFNRWTKA VDNAAAMGID ALIISDIGVL EYAANTYPEL ELHLSVQASA
TNVAAIDFYK KNFNIKRVVL PRVLSIHQVK QLSRNLTSDV DLEVFAFGSL CIMSEGRCYL
SSYMTGESPN TVGACSPAKY VRWQETENGL ESRLNNILID RYGEGENAGY PTLCKGRFDV
QGKTFHALEE PTSLNTLSLV PELFSANVAS VKIEGRQRSP AYVEQVTRTW RAAIDRYKAN
PEGYSVEPQW DATLANVSEG TQTTLGAYHK KWQ
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