| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0597 |
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| Symbol | nusA |
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| ID | 6986558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 658434 |
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| End bp | 659921 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643378984 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_002262117 |
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| Protein GI | 209694189 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.023824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAG AAATCTTAGC TGTTGTAGAA GCAGTATCAA ATGAAAAAGC TGTTCCTCGT
GAACGAATTT TTGAAGCATT AGAAATCGCA TTAGCAACAG CAACAAAGAA AAAATCTGCG
CTGGAAATTG AAGTACGTGT AGCGATTGAT CGCAAAACAG GTGCAGTTGA AACTTTCCGT
CGTTGGGTTG CGGTTGCTCA AGTTGAGCAC CCTACATTAG AAATATCTAT TGAAGCGGCA
CAATTTGAAG ATGAAACAAT CGAAATCGGT GGTTTTATTG AAGATGATAT CGAATCAGTA
ACGTTTGACC GTATTACGAC ACAAACAGCG AAGCAAGTTA TCGTACAAAA AGTACGTGAA
GCTGAGCGTG CGATGATCGT TGAGCAGTTT ATTGATAACG AAGGTGAGTT AATCACTGGT
ATCGTTAAAA AAGTAAACCG CGATGCAATT ATCGTTGATC TAGGTAGCAA CGCTGAAGCG
GTTATTTTAC GTGAAGATCA ACTTCCACGT GAAAATTTCC GTCCAGGTGA CCGTGTTCGT
GGTCTGCTAT ATGCAGTTAA ACCAGAAGCT CGCGGTTTCC AGTTATTCAT GACTCGCTCA
AAAGGCGTAA TGTTAACTGA ATTGTTCCGC GTTGAAGTGC CTGAAATCGG TGAAGAACTG
ATTGAAATTA AAGCCGCTGC TCGTGATCCT GGTTCTCGTG CTAAAATCGC TGTGAAAACA
AACGATAAAC GTATTGATCC TGTTGGTGCG TGTGTTGGTA TGCGTGGCGC TCGTGTTCAA
GCTGTATCAA ATGATCTTGG TGGCGAACGT ATTGATATCG TGCTTTGGGA TGATAATCCT
GCACAGTTTG TTATCAACTC TATGGCTCCA GCAGAAGTGG CTTCTATTAT TGTAGATGAA
GACAACAATA CGATGGATAT TGCTGTTGAA GCTGATAATC TAGCACAAGC AATTGGCCGT
AGTGGTCAAA ATGTACGTCT AGCGTCTCAA CTGACTGGTT GGGAACTTAA CGTAATGACT
GTTGCTGACC TTAATAAGAA GCACCAAGAA GAAGCTCAAG GTTCTATTGA TGCATTTGTT
AAGCATTTAG ACATTGATGC AGATTTTGCT CAACTATTAG TTGAAGAAGG TTTCACTACG
CTTGAAGAGA TCGCTTACGT ACCAGTAAAC GAACTATTAG AAGTGGAAGC TTTAGACGAA
GAAACAGTGG ATCTTCTTCG TACTCGCGCT AAAGAAGCAT TAACAACTCT CGCACTAGCA
CAAGAAGAGT CTCTTGATGG TATTGAACCA GCAGAAGACT TACTTGCTCT TGAAGGTCTA
GAGCGTGAAT TGGCATTTAA ATTTGCAGCT AAAGGTGTAA TTACACTTGA AGATCTTGCA
GACCAAGGTG TTGATGAGTT GTCTGATATT GAAGACTTAA CAGAAGAACG TGCTGGTGAG
TTAATCATGG CTGCACGTAA TATTTGTTGG TTTAGCGACG AAGCATAA
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| Protein sequence | MNKEILAVVE AVSNEKAVPR ERIFEALEIA LATATKKKSA LEIEVRVAID RKTGAVETFR
RWVAVAQVEH PTLEISIEAA QFEDETIEIG GFIEDDIESV TFDRITTQTA KQVIVQKVRE
AERAMIVEQF IDNEGELITG IVKKVNRDAI IVDLGSNAEA VILREDQLPR ENFRPGDRVR
GLLYAVKPEA RGFQLFMTRS KGVMLTELFR VEVPEIGEEL IEIKAAARDP GSRAKIAVKT
NDKRIDPVGA CVGMRGARVQ AVSNDLGGER IDIVLWDDNP AQFVINSMAP AEVASIIVDE
DNNTMDIAVE ADNLAQAIGR SGQNVRLASQ LTGWELNVMT VADLNKKHQE EAQGSIDAFV
KHLDIDADFA QLLVEEGFTT LEEIAYVPVN ELLEVEALDE ETVDLLRTRA KEALTTLALA
QEESLDGIEP AEDLLALEGL ERELAFKFAA KGVITLEDLA DQGVDELSDI EDLTEERAGE
LIMAARNICW FSDEA
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