Gene VSAL_I0592 details

Gene Information

• Locus tag: VSAL_I0592
• Symbol: hflB
• ID: 6989210
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 652796
• End bp: 654778
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 643378977
• Product: cell division protein FtsH
• Protein accession: YP_002262112
• Protein GI: 209694184
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000468831
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAA ATCTAATATT ATGGCTGGTT ATCGCGGTTG TTTTAATGTC GGTATTCCAA 
AGCTTTGGAC CGAGCGACAG CTCTGGTCGT TCAGTTGATT ACACCACTTT TGTTAAAGAG 
GTTGGTAATA GTCAAGTTCA AGAAGCAACC TTTAATAATC GTGAAATTAA AGTAACAAAG 
AGTGATGGTA CTCGCTATGT AACCTACATG CCGGTATACC AAGACCCTAA ATTGCTTGAT 
GACCTGATTA ATCAAAATGT AATCGTTAAA GGCACACCAC CTGAAGAGCA GAGCTTACTT 
GAGTCTATCT TTATTTCGTG GTTCCCAATG ATTCTTCTTA TTGGTGTTTG GATCTTCTTT 
ATGCGTCAAA TGCAAGGCGG CGGTGGCAAA GGGGCAATGT CCTTTGGCAA AAGCAAAGCT 
AAGATGATGA CGGAAGAACA GATCAACACA ACCTTTGATG ATGTTGCTGG TTGTGATGAA 
GCAAAAGAAG ACGTTAAAGA ATTAGTTGAT TATTTACGTG AACCAAGCCG ATTCCAGAAA 
CTAGGTGGTA AAATCCCAAC AGGTGTTTTA TTGGTTGGTC CTCCTGGTAC AGGTAAAACG 
CTAATTGCAA AAGCAATTGC AGGTGAAGCG AAAGTACCGT TTTTCTCAAT TTCAGGTTCT 
GATTTCGTTG AAATGTTTGT TGGTGTTGGT GCCTCTCGTG TGCGTGACAT GTTTGAACAA 
GCGAAAAAAT CATCGCCTTG TATCATCTTT ATCGATGAAA TCGATGCTGT AGGCCGTCAA 
CGTGGCGCCG GTGTTGGTGG TGGTAATGAT GAACGTGAAC AAACATTGAA CCAAATGCTG 
GTTGAAATGG ATGGTTTTGA AGGTAACGAA GGTGTGATCG TTGTTGCTGC GACTAACCGT 
CCCGATGTAC TTGATGCTGC ATTATTACGT CCGGGTCGTT TTGACCGCCA AGTTGTTGTT 
GGTTTACCTG ACATACGTGG CCGTGAGCAA ATTCTTCAAG TACACATGCG TAAAGTACCG 
TTAGGCAGTG GTGTTGAACC ATCGCTGATC GCTCGTGGTA CACCTGGTTT CTCTGGTGCT 
GACTTAGCTA ACTTAGTTAA TGAAGCCGCA TTATTTGCAG CTCGAACCAA TAAACGTGTT 
GTGTCAATGG TTGAGTTTGA ACTTGCTAAA GACAAAATAA TGATGGGCGC AGAGCGAAAA 
TCAATGGTAA TGACCGAAGA GACTAAAACC TCAACGGCTT ACCATGAAGC AGGTCACGCC 
ATTGTTGGTC GTTTAGTGCC TGAACATGAT CCTGTTTATA AAGTATCGAT TATTCCACGT 
GGCCGTGCGC TAGGTGTAAC AATGTATTTA CCAGAACAAG ATCGTGTAAG CATGAATCGC 
CAGCACTTAG AGTCTATGAT TTCAAGTTTG TATGGTGGTC GTTTAGCTGA AGAGCTAATT 
TACGGTGTTG ATAAAGTATC TACGGGTGCT TCAAACGATA TTGAAAGAGC CACTGATATT 
GCACGTAAAA TGGTAACTCA ATGGGGCTTC TCTGAATCGC TTGGGCCATT ATTATACGCA 
GAAGATCAAG GTGACCCTTT CTCTGGCCAC GGTAGTTCTC ATCAATCAAA GCATGTTTCT 
CCTGAAACGT TGAGACTGAT TGATGCTGAA ATCCGTACTA TCATTGATCG CAACTATGCT 
CGTACTAGAC AGATCCTTGA AGATAATATG GATCTGCTGC ATTCAATGAA AGATGCATTG 
ATGACGTTTG AAACCATTGA TGCGGGTCAA ATTGATGACT TGATGGAGCG TAAAACTGAA 
ATTCGTGAAC CTCAAGGGTG GGGAGATGAT AATCAAACTA AACCTGAAGA GAAAAACGAA 
AAACCAGCTG AAGCAGACGT TGAGATTAAA ACTGAAGAAT CTAAAGTAGA AGAAAGTACT 
GAGGAAGAAA AGCCTCAAGT TGCTGAAGAA ACGAAAAAAG ATTCCGATTC ATCAGAAAAA 
TAA 

 

Protein sequence

MAKNLILWLV IAVVLMSVFQ SFGPSDSSGR SVDYTTFVKE VGNSQVQEAT FNNREIKVTK 
SDGTRYVTYM PVYQDPKLLD DLINQNVIVK GTPPEEQSLL ESIFISWFPM ILLIGVWIFF 
MRQMQGGGGK GAMSFGKSKA KMMTEEQINT TFDDVAGCDE AKEDVKELVD YLREPSRFQK 
LGGKIPTGVL LVGPPGTGKT LIAKAIAGEA KVPFFSISGS DFVEMFVGVG ASRVRDMFEQ 
AKKSSPCIIF IDEIDAVGRQ RGAGVGGGND EREQTLNQML VEMDGFEGNE GVIVVAATNR 
PDVLDAALLR PGRFDRQVVV GLPDIRGREQ ILQVHMRKVP LGSGVEPSLI ARGTPGFSGA 
DLANLVNEAA LFAARTNKRV VSMVEFELAK DKIMMGAERK SMVMTEETKT STAYHEAGHA 
IVGRLVPEHD PVYKVSIIPR GRALGVTMYL PEQDRVSMNR QHLESMISSL YGGRLAEELI 
YGVDKVSTGA SNDIERATDI ARKMVTQWGF SESLGPLLYA EDQGDPFSGH GSSHQSKHVS 
PETLRLIDAE IRTIIDRNYA RTRQILEDNM DLLHSMKDAL MTFETIDAGQ IDDLMERKTE 
IREPQGWGDD NQTKPEEKNE KPAEADVEIK TEESKVEEST EEEKPQVAEE TKKDSDSSEK