Gene VSAL_I0589 details

Gene Information

• Locus tag: VSAL_I0589
• Symbol: greA
• ID: 6988931
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 651095
• End bp: 651571
• Gene Length: 477 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 643378974
• Product: transcription elongation factor GreA
• Protein accession: YP_002262109
• Protein GI: 209694181
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00434692
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AATATGGACA AGGTACCAAT GACAATACGT GGTGAGAAAC TACTGCGTGA TGAATTAGAA 
GTACTATTAA AGCGTCGCCC TGTGATTTCA AAAGCCATTG GTGAAGCTCG TGAACTTGGT 
GATTTAAAAG AAAATGCCGA GTATCATGCC GCCCGTGAAG ACCAAGGTAT TTGTGAAGCT 
CAAATTCGTG ATATTGAATA TAAGCTATCA GTTGCTCAGG TTATTGATGT AACAAAGATG 
ACAAATACAG GAAAGGTTAT TTTTGGTGCG ACAGTGACTT TACTCGACGT TGATACTGAA 
GATAAAGTGA AATACCAAAT CGTTGCAGAT GATGAAGCAA ACATAAAAGA GGGGCGAATT 
TCGGTTAATT CCCCTATTGC TCGTGGTTTG ATTGGTAAAC TGGTTGAAGA TGAAGTTAGT 
ATCCGAACAC CTGGTGGAAC GAAAGAGTTT GAAATTGACG CGGTAGAATA TATTTAA 

 

Protein sequence

MDKVPMTIRG EKLLRDELEV LLKRRPVISK AIGEARELGD LKENAEYHAA REDQGICEAQ 
IRDIEYKLSV AQVIDVTKMT NTGKVIFGAT VTLLDVDTED KVKYQIVADD EANIKEGRIS 
VNSPIARGLI GKLVEDEVSI RTPGGTKEFE IDAVEYI