| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0587 |
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| Symbol | dacB |
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| ID | 6988303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 647963 |
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| End bp | 649372 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643378972 |
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| Product | D-alanyl-D-alanine carboxypeptidase/endopeptidase |
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| Protein accession | YP_002262107 |
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| Protein GI | 209694179 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0311265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTAT CTCGATTATT TATCTTATCT CTCTCGCTTT ATTCTTTTTC AACCTTTGCC
AGCATTCCAT CAAGCATTCA ACTCCTTCCT AGTGGGAGCC GTGCTGCTAT TGTGGTTGAA
TCTCTACACG ATCAGAGTAT TGAGTTTCAA CAAAAAGAAA ATGAACTTCT CCCCCCAGCC
AGTACACTAA AAGTAGCGAC GGCACTTGCT TCTCGTTTAG CTCTTGGGAA AAACTTTCAA
TTTAAAACGA CTTTGCATAA AACAAAACAC AATAGTGTTC AATTAACCTT TTCTGGAGAT
CCTTCACTAA CAAGAGAAAA CCTTTCATCC CTATTTAAAA ATAGCGGATT AAAAAACATT
AAAGGCGATC TATGGGTTGA TGATTCGATT TTCACTGGTT ATGAGCGTGC TGTCGGCTGG
CCATGGGATA TTCTCGGCGT GTGTTACAGC GCACCATCAA GCGCATTAAG CATTGATGAA
AACTGTGTGC AAGCATCAAT ATCAACAAAT GAGAACGGGA CTACCCGTGT CTTCGTGCCA
ATACACCAAC CAATTTCATT CACAACTGCA GCTCGTACTG TCAGTGCCAA AGAGAAAAAA
AATTCGTTTT GTGATTTAGA GCTAACCACT CAAGGCAATA ACTACCACCT ATCAGGCTGC
TTAGTCGCAA GAAGCAAACC ATTACCATTA AAGTTTGCAG TGCAAAATAC AACAGAATTC
ACCGAACAAA CGCTATTACG CATCCTTAAT GAACAAAATA TTAATTTATC TGGGAAAATA
ATATTCGGTA ATTCGACCGG GAAAATACAG AAAACAGTGC TGCTTGCCTC TCACCAATCA
GAACCGCTAA TGGTATTACT TAATCACATG TTGAAAAAAT CAGATAACCA CTACGCTGAT
AATTTAGTGA AAACGTTAGG CCATTATCAT TACCAACAAC CGGGAAGCTT TAGTAATGGC
ACCGCAGCGG TTAAAGACAT CTTATTAAAA CAAGCTAATG TGGATTTAAC CAACGCAGTT
ATTGTAGATG GCTCTGGTTT ATCCCGAAAT AATAGAATGA CAGCGAATCA GATGAAAAGT
CTTCTTCAAT TTGTCTATCG ATACGATAAA GAGTTAGGGT TAATCGCCTT ACTACCGACT
TCTGGTATCG ATGGCACATT GATATACCGT AATAGTATGA GAAAAGAGCC AATTAAAGGC
AGCATAAAAT CGAAAAGTGG CTCATTGTTT GGTAGCTATA ACATGGCAGG ATTTGTAGGT
TTAGAAGGAA ATAATCCACA GCTATTTGTT CAGTTTGTTG CAGATTATCA CCCAATAGCA
GCAGAAGAAG GGGTTTTACC AGTAGAGCGA CCAATTGATA GCTTTGAGAA AGCGTTCTAT
CAGGCGCTAA TTAAGTTATC AAACGATTGA
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| Protein sequence | MPLSRLFILS LSLYSFSTFA SIPSSIQLLP SGSRAAIVVE SLHDQSIEFQ QKENELLPPA
STLKVATALA SRLALGKNFQ FKTTLHKTKH NSVQLTFSGD PSLTRENLSS LFKNSGLKNI
KGDLWVDDSI FTGYERAVGW PWDILGVCYS APSSALSIDE NCVQASISTN ENGTTRVFVP
IHQPISFTTA ARTVSAKEKK NSFCDLELTT QGNNYHLSGC LVARSKPLPL KFAVQNTTEF
TEQTLLRILN EQNINLSGKI IFGNSTGKIQ KTVLLASHQS EPLMVLLNHM LKKSDNHYAD
NLVKTLGHYH YQQPGSFSNG TAAVKDILLK QANVDLTNAV IVDGSGLSRN NRMTANQMKS
LLQFVYRYDK ELGLIALLPT SGIDGTLIYR NSMRKEPIKG SIKSKSGSLF GSYNMAGFVG
LEGNNPQLFV QFVADYHPIA AEEGVLPVER PIDSFEKAFY QALIKLSND
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