| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0584 |
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| Symbol | dapB |
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| ID | 6988729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 642091 |
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| End bp | 642900 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643378969 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | YP_002262104 |
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| Protein GI | 209694176 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0724522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAGAG TCGCAATTGC TGGTGCAGCA GGAAGAATGG GCCGTAATTT AATTAAAGCT
GTTAATGGGT CTCAATATGC GGTTCTTGCA GCAGCGAGTG AGCATCCTGA GTCAAGTTTG
ATTGGTGTTG ATGTTGGTGA AATGGCAGGG TTAGGTAAAT CAGGCATTGT TATTGTCGAT
GATCTTGCGA AAGCCGTGGA TGACTTCGAT GTCATTATTG ATTTTACGTT ACCGATTTCA
ACATTAAAAA ACATCGAACT ATGCCAAGAG CATAACAAAG CGATTGTTAT TGGTACTACT
GGGTTTAGTG AACCAGGCAA AGAGTTAATT GACCAAGCCG CGAAAGAGAT CCCTATCGTG
ATGGCACCAA ATTACAGTGT TGGCGTAAAT GTAGTATTTA AGTTACTAGA GAAAGCCGCA
AAAATAATGG GTGATTATTG TGATATCGAA ATTATAGAAG CGCATCACCG TTATAAAGTT
GATGCACCGT CAGGTACTGC TATTGGCATG GGAGAAGCAA TAGCGGGAGC CATGGGCAAT
AAGCTTGATG ATGTCGCTGT TTATACTCGA GAAGGTATTA CCGGTGAGCG CACTAAGAAT
GAAATTGGTT TTGCTACGAT TCGAGCGGGT GACATTGTCG GTGAACATAC CGCCATGTTT
GCTGATATTG GTGAACGTGT TGAAATAACA CATAAAGCCA CTGATAGGAT GACGTTTGCA
AATGGAGCGG TGAGAGCCTC CCATTGGTTA CATCAAAAGT CGCCTGGTTT TTATACCATG
CATGATGTTT TAGACTTGGA TCAGATTTAA
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| Protein sequence | MVRVAIAGAA GRMGRNLIKA VNGSQYAVLA AASEHPESSL IGVDVGEMAG LGKSGIVIVD
DLAKAVDDFD VIIDFTLPIS TLKNIELCQE HNKAIVIGTT GFSEPGKELI DQAAKEIPIV
MAPNYSVGVN VVFKLLEKAA KIMGDYCDIE IIEAHHRYKV DAPSGTAIGM GEAIAGAMGN
KLDDVAVYTR EGITGERTKN EIGFATIRAG DIVGEHTAMF ADIGERVEIT HKATDRMTFA
NGAVRASHWL HQKSPGFYTM HDVLDLDQI
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