| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0576 |
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| Symbol | hlyU |
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| ID | 6988896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 633619 |
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| End bp | 633930 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643378961 |
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| Product | transcriptional activator HlyU |
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| Protein accession | YP_002262096 |
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| Protein GI | 209694168 |
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| COG category | [K] Transcription |
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| COG ID | [COG0640] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000103894 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGGTA TATTTATGGA TTTACAACAA ATGGAGAAAA ACGCTCCGCA AGCAGTCACA
CTACTAAAAG CAATGGCTAA TGAACGTCGA TTATTTATTC TTTGTTTATT GCTGGAAGGT
GAACTTTCAG TAGGTCAAAT AGCAGAACAG TTGTCATTAA GTCAATCTGC ATTGTCTCAA
CATCTTGGTT GGTTGCGTAA AGATGCGTTG GTTTCGACAA GAAAAGAGTC TCAAACTGTG
TTTTATTCAT TAAGCAGTCA TGAAGTTAAA TCAGTAATCC AATTATTACA TAATTTATAT
TGTTCAAAAT AA
|
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| Protein sequence | MAGIFMDLQQ MEKNAPQAVT LLKAMANERR LFILCLLLEG ELSVGQIAEQ LSLSQSALSQ
HLGWLRKDAL VSTRKESQTV FYSLSSHEVK SVIQLLHNLY CSK
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