Gene VSAL_I0568 details

Gene Information

• Locus tag: VSAL_I0568
• Symbol: mutH
• ID: 6986555
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 624417
• End bp: 625085
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643378953
• Product: DNA mismatch repair protein
• Protein accession: YP_002262088
• Protein GI: 209694160
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3066] DNA mismatch repair protein
• TIGRFAM ID: [TIGR02248] DNA mismatch repair endonuclease MutH

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.128312
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCCCT TACCACCTAA AACAATTGAT GAACTGTTGT CTAGAGCAGA AAGCATTGCT 
GGTTATACGT TGGCTGAACT TGCGCTGCAA GCTGGAATAC CCGTTCCTGA AAATTTAAAG 
CGCGATAAAG GCTGGGTAGG TCAATTACTC GAATGGCATC TTGGTGCGTC AGCAGGCAGT 
AAACCTGTAC CTGATTTCAT TGATCTTGAT ATTGAATTAA AAACAATTCC AATCAGTCAT 
TCTGGTAAAC CATTAGAGAC CACCTTTGTG TGTGTCGCGC CCTTAACTGG CGTACATAGC 
CTACAATGGA AAGAATCACA CGTTAGACAC AAGCTCTCTC ATGTATTGTG GATCCCCGTG 
GAAGGTGAAA GAGAAATTCC GGTCGGTGAT CGTCATGTCG GTTACCCAGT ACTTTGGAAA 
CCATCAATCA AAGAAGAACA ACAATTACAA CAAGATTGGG AAGAGTTAAT GGATCTCATC 
GTGTTAGGAA AAGTAGAATC GATTACGGCA AGGCATGGGG AAGTATTACA ACTAAGACCA 
AAAGCAGCAA ACAGTAGAGC ATTAACAGAA GCCTATGGTG ATAATGGTCA GCCAATAAAA 
ACCTTACCTA GAGGGTTTTA CTTAAAAACG CACTTTACCC ACTCTATATT AACATCCTTT 
TTTAACTAA 

 

Protein sequence

MTPLPPKTID ELLSRAESIA GYTLAELALQ AGIPVPENLK RDKGWVGQLL EWHLGASAGS 
KPVPDFIDLD IELKTIPISH SGKPLETTFV CVAPLTGVHS LQWKESHVRH KLSHVLWIPV 
EGEREIPVGD RHVGYPVLWK PSIKEEQQLQ QDWEELMDLI VLGKVESITA RHGEVLQLRP 
KAANSRALTE AYGDNGQPIK TLPRGFYLKT HFTHSILTSF FN