| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0566 |
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| Symbol | lysS |
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| ID | 6989004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 621111 |
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| End bp | 622616 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643378951 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_002262086 |
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| Protein GI | 209694158 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.302329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACC AAGTACAACT AGATGAAAAC AAACTGATTG CAGAACGCCG TGGTAAATTA
GACCATATCC GTCAAGCATG TAAGGCTAAT GGCCACCCGA ATGACTTCCG TCGTGACAGT
CTTGCTGCGG ATCTTCAATC GGAATTTGGT GAAAAGACCA AAGAAGAGCT AGAAGAATTA
AACCACATTG TAGCAATTGC TGGACGTGTA ATGGCGAAGC GCGGTCCTTT CTTATTGATC
CAAGAAGTGT CTGGCAAGAT CCAAGCTTAC GCATCAAAAG ATGTGCAAAA AGAGCTTAAA
GAAAAATACC AAGGCCTAGA TATCGGTGAC ATCATCGGTG TTAAAGGTGC TCTACATAAA
TCAGGTAAAG GCGATCTTTA CGTGAATATG GAAGAGTTCG TACTGCTAAC TAAAGCACTA
CGTCCATTGC CTGAAAAATT CCACGGTTTA ACTGACCAAG AAATGCGTTA CCGTCAACGT
TATGTTGACC TTATCGTAAA TGAAGATTCT CGTACTGCAT TTATTATCCG CTCTAAAGTG
GTTTCTGCAA TTCGTAACTT CATGGTTGAT AAAGGCTTCA TGGAAGTTGA AACGCCAATG
ATGCACGTTA TCCCTGGTGG CGCATCGGCT CGTCCATTCG TTACTCACCA TAATGCACTT
GATGTTGACA TGTACTTACG TGTTGCACCT GAGCTTTATC TTAAACGTCT AGTTGTTGGT
GGTTTTGAGC GTGTATTCGA AATCAACCGT AACTTCCGTA ATGAAGGTCT TTCTCCTCGT
CATAATCCAG AATTCACAAT GATGGAATTC TACATGGCGT ACGCAGATTA CAACGATCTT
ATGGATTTAA CAGAAGCAAT GCTATCTCAA GTGGCTATTT CTGTTTTAGG CAGCGATAAA
ATGCCTTACG GCGAATACAC AGTAGATTTT GGCGGTAAAT ATGCACGTTT GAGCATGTTA
GACGCAATCA AAATGTACAA CCCTGAGCAC GCTGAAATTC AAGCGCTAAC GTATGACGGC
GTTCAAGATC GTGATCTTAT GGTTTCTATC GCGAAATCAG TTCATGTAGA AGTAGAAAGC
TTCTGGACAT GTGGTCAACT TCTTGAAGAA ATCTTTGGTG AAACAGCGGA ACCTAAGCTA
ATGCAACCAA CGTTCATTAC TGAATACCCA GCGGATATTT CACCACTGGC TCGTCGTAAT
GATAATAATG CTTTCATTAC TGACCGTTTT GAATTCTTCA TTGGTGGTCG TGAAGTTGCA
AATGGCTTCT CTGAGCTGAA TGATGCACAA GATCAAGATG AACGCTTTAA AGCACAAGTA
AGCGCGAAAG AATCTGGTGA TGATGAAGCA ATGTTCTACG ATGCAGATTA CATCACTGCA
CTTGAGCACG GCTTACCACC AACAGCAGGT CAAGGTATCG GTATTGACCG TCTAGTAATG
TTATTCACTA ACACTCACAC TATTCGTGAC GTGATTTTAT TCCCTTCTAT GCGTCCACAA
GCATAA
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| Protein sequence | MTDQVQLDEN KLIAERRGKL DHIRQACKAN GHPNDFRRDS LAADLQSEFG EKTKEELEEL
NHIVAIAGRV MAKRGPFLLI QEVSGKIQAY ASKDVQKELK EKYQGLDIGD IIGVKGALHK
SGKGDLYVNM EEFVLLTKAL RPLPEKFHGL TDQEMRYRQR YVDLIVNEDS RTAFIIRSKV
VSAIRNFMVD KGFMEVETPM MHVIPGGASA RPFVTHHNAL DVDMYLRVAP ELYLKRLVVG
GFERVFEINR NFRNEGLSPR HNPEFTMMEF YMAYADYNDL MDLTEAMLSQ VAISVLGSDK
MPYGEYTVDF GGKYARLSML DAIKMYNPEH AEIQALTYDG VQDRDLMVSI AKSVHVEVES
FWTCGQLLEE IFGETAEPKL MQPTFITEYP ADISPLARRN DNNAFITDRF EFFIGGREVA
NGFSELNDAQ DQDERFKAQV SAKESGDDEA MFYDADYITA LEHGLPPTAG QGIGIDRLVM
LFTNTHTIRD VILFPSMRPQ A
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