| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0564 |
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| Symbol | recJ |
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| ID | 6988425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 617993 |
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| End bp | 619732 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643378950 |
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| Product | ssDNA exonuclease RecJ |
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| Protein accession | YP_002262085 |
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| Protein GI | 209694157 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.755584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAG TGAAACGTCG TATTATTCCT GTTATTCCAA ACTTTCCGAG TTCAATTCCT
TCAATCTTAC AACGGATTTA TGCGACTCGT GGGATCACAT CTAATAATCA GTTAGAACGC
GGTGCTAAGC ATTTACTGTC ATTTCAGTCA ATGCATGGTA TTGAAAAAGC GGTAGATATT
TTAGTTGAAG CGATAGCAAA ACAAACACGA ATTATTGTTG TGGGTGACTT TGATGTTGAT
GGAGCGACGA GCTCTGCACT GTCAGTCATG GCATTTCGAA TGATGGGCAG CAATAATGTG
GATTACTTAG TCCCTAACCG TTTCGAAGAT GGGTACGGAT TAAGTCCTGA TGTGGTTGAT
CAAGCCAAAG CAATGGGGGC TGAGATCATT ATGACCGTTG ATAATGGCGT ATCATCTATT
GATGGTGTCG CTGCTGCTAA AGCTTATGGT ATGCAAGTGG TGGTGACGGA TCATCATTTA
CCGGGGTCAT CATTACCAAT TGCAGATTCG ATTGTGAATC CAAACCTTGA AGAGTGTGCC
TTTCCTTCTA AATCGTTAGC TGGCGTAGGG GTTGCTTTTT ATTTGATGTT GGCTATCCGT
GCGCGTTTAC GTGAAAACAA CTGGTTTGAA ACGCAAAATA TTCCTATCCC TAACCTTGCT
GACTTATTGG ATTTAGTCGC TTTAGGTACC GTTGCTGATT TAGTGGCTTT GGATGAAAAT
AACCGTATTT TAGTGCATCA AGGTATTCAA CGAATTCGAG CTGGGAAATG CCGTCCAGGA
ATTCAAGCGT TGATCGAAGT TGCCAATAAA GTGCCATCTA GGATCAATGC TTCAGACTTT
GGTTTTGCGT TAGGCCCTAG AATTAATGCG GCAGGGCGTT TGGATGATAT GTCATTTGGC
GTAGAACTTT TGATGTCCAA CAACATTCAT GCTGCTCGTC GTATGGCGTC AGAATTAGAT
GCTTTGAATC AAACTCGTAA AGAAATAGAA CAAGGCATGA AAGAAGAAGC GATGGCAATC
TGTGAGCGCT TAGAGTTTGG CGCACAAAGT GAATTGCCAT TTGGTTTAGT TTTATTTCAA
CGAGATTGGC ACCAAGGTGT GATTGGTATT TTAGCATCTC GTCTCAAAGA GAAATACCAT
CGTCCAGTGA TTGCTTTTGC TGATGGTGGT GATGGGTTAA TTAAAGGATC ATGCCGTTCA
ATCTCGGGTT TTCATATGCG TGATGCGTTG GATTTAATTG ATACCCGAAA CCCCGGTTTA
ATCTTAAAAT TTGGTGGTCA TGCGATGGCT GCGGGATTAA GTATTAAAGA AGTCGATTAC
AAGCGTTTCT CCCAAGCGTT TGATGACGTG GTCCGTGAAT CAGTAGAAGA AGAAGCGTTA
ACTGGGGTGG TATTATCTGA TGGCGAATTA ATGCCAGAAG AATTTACGTT AGGTACCGCT
GAGATCCTTC GTGCTGGTGG TCCTTGGGGA CAAGCTTTCC CTGAACCTAT TTTTGATGGT
GAATTTAAAG TACTTAATCA ACGTTTAGTC GGTGAAAAGC ACTTAAAATT AATGTTAGAA
CCAATACATA AAGATTTTCC AACCAACAAA ATGATCGATG CCATTGCCTT TAATATTGAC
GTACGTCGTT GGCCAGATGC TTCAGTACAA AAAGTGAAGT TAGCTTACCG TTTAGACATT
AATGAATTCA GAGGCAATCA GACATTACAG TTAATGGTTG ACTATATAGA ACCAATATAG
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| Protein sequence | MIEVKRRIIP VIPNFPSSIP SILQRIYATR GITSNNQLER GAKHLLSFQS MHGIEKAVDI
LVEAIAKQTR IIVVGDFDVD GATSSALSVM AFRMMGSNNV DYLVPNRFED GYGLSPDVVD
QAKAMGAEII MTVDNGVSSI DGVAAAKAYG MQVVVTDHHL PGSSLPIADS IVNPNLEECA
FPSKSLAGVG VAFYLMLAIR ARLRENNWFE TQNIPIPNLA DLLDLVALGT VADLVALDEN
NRILVHQGIQ RIRAGKCRPG IQALIEVANK VPSRINASDF GFALGPRINA AGRLDDMSFG
VELLMSNNIH AARRMASELD ALNQTRKEIE QGMKEEAMAI CERLEFGAQS ELPFGLVLFQ
RDWHQGVIGI LASRLKEKYH RPVIAFADGG DGLIKGSCRS ISGFHMRDAL DLIDTRNPGL
ILKFGGHAMA AGLSIKEVDY KRFSQAFDDV VRESVEEEAL TGVVLSDGEL MPEEFTLGTA
EILRAGGPWG QAFPEPIFDG EFKVLNQRLV GEKHLKLMLE PIHKDFPTNK MIDAIAFNID
VRRWPDASVQ KVKLAYRLDI NEFRGNQTLQ LMVDYIEPI
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