Gene VSAL_I0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0555 
Symbolepd 
ID6989299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp607905 
End bp608924 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content39% 
IMG OID643378941 
Producterythrose 4-phosphate dehydrogenase 
Protein accessionYP_002262076 
Protein GI209694148 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.611764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGAG TGGCGATAAA TGGATTTGGT CGAATTGGTC GTAGTGTATT ACGTGCTTTG 
TATGAAAGTG GTAAGCGTGA TCAAATTGAA ATCGTGGCTG TGAATGAATT ATCACAACCA 
GAAGGAATGG CGCACCTTCT TCAATACGAT TCAACTCATG GACGTTTTCT GCATAAAGTC 
ACCCATGATC AAGAATATCT TTATATCGAT TTACCTAATG GCTCTCAAGA TCGAATTCGT 
ATTGTACATC AAGCCGATAT TTCTCTTTTG CCATGGCAAT CATTGCAAGT AGATTTAGTG 
CTGGATTGCA CTGGTGTTTA TGGATCTAAA GCGGATGGCG AGAGGCACAT TGATGCGGGG 
GCTAAAAAGG TTTTATTTTC ACACCCAGGA AGCGCAGACT TAGATAACAC TATCATTTAC 
GGTGTTAATC ATGACACATT GCTTCCTGAG CATAGAGTTG TCTCTAATGG GTCTTGTACT 
ACTAACTGTA TTATCCCAGT GATTAAGGCG ATTGATGATG CGTTTGGTAT TGAATCTGGC 
ACGATTACGA CGATTCACTC TGCGATGAAT GATCAACCAG TGATTGATGC GTATCATACT 
GATTTACGTC GAACTCGAGC AGCAAGCCAG TCTATAATTC CAGTAGATAC AAAACTGCAT 
AAAGGTATTG AACGAATTTT TCCGAAATTT TCCAACAAAT TTGAGGCTAT TTCTGTGCGA 
GTACCGACGG TAAACGTCAC TGCGATGGAT TTAAGTGTAA CAATTAATAC AAATGTGAAA 
GTTAATGACA TAAATCAAAC CATTGTTAAT GCATCTCAGT GTACATTACA TAACATTGTT 
GATTATACTG AAGCGCCACT TGTTTCTATC GACTTTAATC ATGATCCCCA TAGCGCGATT 
GTCGATGGTT CACAAACAAG AGTTAGTAAC GGGCATTTAG TTAAAATGCT GGTTTGGTGT 
GATAACGAAT GGGGCTTTGC TAATCGGATG CTAGATACCG CATTAGTAAT GAAAAAATAA
 
Protein sequence
MLRVAINGFG RIGRSVLRAL YESGKRDQIE IVAVNELSQP EGMAHLLQYD STHGRFLHKV 
THDQEYLYID LPNGSQDRIR IVHQADISLL PWQSLQVDLV LDCTGVYGSK ADGERHIDAG 
AKKVLFSHPG SADLDNTIIY GVNHDTLLPE HRVVSNGSCT TNCIIPVIKA IDDAFGIESG 
TITTIHSAMN DQPVIDAYHT DLRRTRAASQ SIIPVDTKLH KGIERIFPKF SNKFEAISVR 
VPTVNVTAMD LSVTINTNVK VNDINQTIVN ASQCTLHNIV DYTEAPLVSI DFNHDPHSAI 
VDGSQTRVSN GHLVKMLVWC DNEWGFANRM LDTALVMKK