Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0550 |
Symbol | |
ID | 6986549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 602822 |
End bp | 603535 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643378936 |
Product | endonuclease I precursor |
Protein accession | YP_002262071 |
Protein GI | 209694143 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTACTTTA TGAAATTAAT TCGCTTAGTT ATCAGTCTTA TTGCTGTCAG TTTCACTGTT AACGTAATGG CAGCACCTCC TTCTTCTTTC TCAAAAGCAA AAAAAGAAGC CGTCAAAATC TATCTTGATT ACCCAACCTC CTTTTATTGT GGCTGTGACA TTACGTGGAA AAATAAAAAG AAAGGGATCC CTGAATTAGA AAGCTGCGGA TACCAAGTCC GTAAACAAGA AAAACGAGCC AGTCGTATTG AATGGGAGCA TGTTGTTCCA GCATGGCAAT TTGGTCATCA ACGTCAATGT TGGCAAAAAG GTGGGCGTAA AAATTGCACT AGAAACGACA AGCAATTCAA ATCAATGGAA GCCGACTTAC ATAATCTAGT GCCTGCGATT GGTGAAGTAA ACGGGGACAG ATCCAACTTC CGATTCTCAC AATGGAATGG AAGCAAAGGC GCTTTCTATG GCCAATGTGC TTTTAAAGTC GACTTCAAAG GCCGTGTTGC CGAGCCACCA GCACAATCTC GTGGTGCCAT TGCCCGAACG TATCTTTATA TGAACAACGA ATATAAATTT AACTTATCAA AAGCACAGCG ACAACTTATG GAAGCATGGA ACAAACAGTA TCCAGTATCA ACTTGGGAAT GTACTCGTGA TGAACGTATA GCAAAAATCC AAGGCAATCA TAATCAATTT GTTTATAAAG CATGCACTAA ATAA
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Protein sequence | MYFMKLIRLV ISLIAVSFTV NVMAAPPSSF SKAKKEAVKI YLDYPTSFYC GCDITWKNKK KGIPELESCG YQVRKQEKRA SRIEWEHVVP AWQFGHQRQC WQKGGRKNCT RNDKQFKSME ADLHNLVPAI GEVNGDRSNF RFSQWNGSKG AFYGQCAFKV DFKGRVAEPP AQSRGAIART YLYMNNEYKF NLSKAQRQLM EAWNKQYPVS TWECTRDERI AKIQGNHNQF VYKACTK
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