Gene VSAL_I0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0547 
Symbol 
ID6989438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp600405 
End bp600968 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content40% 
IMG OID643378933 
Producthypothetical protein 
Protein accessionYP_002262068 
Protein GI209694140 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAA AAAACCATTT TCTGGTTGCT ATGCCAAGTA TGAATGATCC CGTTTTTACA 
CGGAGTGTGA TCTATATTTG TGAGCACGAT TCCGATGGTA CAATGGGGTT ACGCATAAAC 
CAACCAGTGC AAATTTCACT GAAAGGCATG CTTGACCAAA TCAAACTGGA TAATCCTTCC 
CCTATTATCT TCCCTCAAAC GCTATCTCAA CCGGTACTAA ATGGCGGTCC AGTCTCTGAT 
GATCGTGGAT TTGTTCTTCA TTATCCAAAA GACAATTACA GTTCTAGTAT TGAAGTCACC 
GAAGAACTTT CTGTAACGAC GTCTAAAGAT ATTTTGGCAA CCTTAGGTAC CGAAGATCAA 
CCTTATAAAT ATTTAGTCGC TCTTGGCTAT TCTGGCTGGG ATGCAGGGCA ACTAGAGCAA 
GAATTATCTG AAAACACATG GCTAATCTTA GAAGCAGATT CTTCTGTTAT TTTTGATACT 
CCTATTCCTG ATCGTTGGCG CAGAGCTATC GAAATACTAG GCATTAGTCC AGTAAATATA 
TCCAGCGAGG TTGGACACGC ATGA
 
Protein sequence
MDLKNHFLVA MPSMNDPVFT RSVIYICEHD SDGTMGLRIN QPVQISLKGM LDQIKLDNPS 
PIIFPQTLSQ PVLNGGPVSD DRGFVLHYPK DNYSSSIEVT EELSVTTSKD ILATLGTEDQ 
PYKYLVALGY SGWDAGQLEQ ELSENTWLIL EADSSVIFDT PIPDRWRRAI EILGISPVNI 
SSEVGHA