Gene VSAL_I0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0540 
Symbol 
ID6986544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp595227 
End bp595478 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content39% 
IMG OID643378926 
Producthypothetical protein 
Protein accessionYP_002262061 
Protein GI209694133 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00251] conserved hypothetical protein TIGR00251 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.375057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTA AATACGATAA CGATGATTTG GTCTTAAGAC TTTACCTTCA ACCGAAGGCC 
AGTCGAGACC AAATCGTTGG TATACATGGA GAGGAACTCA AAGTAGCGAT TACCGCTCCT
CCTGTTGATG GGAAAGCTAA CGCACATTTG ATTAAGTACT TCTCGAAATT ATTTAAGGTT
GCTAAAGGTA AAATCACAGT AGAAAAAGGA GAACTTAATC GTCACAAACA AGGTTCGAAT
TCACTCTCCT GA
 
Protein sequence
MPIKYDNDDL VLRLYLQPKA SRDQIVGIHG EELKVAITAP PVDGKANAHL IKYFSKLFKV 
AKGKITVEKG ELNRHKQGSN SLS