| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0525 |
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| Symbol | holC |
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| ID | 6989370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 581253 |
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| End bp | 581696 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643378903 |
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| Product | DNA polymerase III subunit chi |
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| Protein accession | YP_002262046 |
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| Protein GI | 209694118 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2927] DNA polymerase III, chi subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.836695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAAG CTTTATTCTA TGTACTTGAA TCGACCTCAC CTGCTGCAAC CCAACCTGGG
TTGTTAAAGT TTGTGTGTCA GCTCGCTCAT TACTATTACT CTCAAAATGC CCGTGTTTAT
ATTTTAAGTG ACGATAAAGA ACAGGCGTTA TTGATTGATG AATTGCTTTG GCAAAATGAT
GTTTCTGAAT TTATTCCTCA TAATCTTATC GGCGAAGGAC CAAAATCAGG GTCACCGATA
GAAATAGGCT GGGGAACATT ACGCCCATCA GGGCGACGTC ATGTACTAAT AAACTTAGCT
CAAGAAGTCG CAACTTTTGC GGTTTCCTTT GCTCAAGTGG TAGACTTCGT ACCCTGTGAA
GAAAAAGTCA AACAACACGC TCGAGAAAGG TATAAAATAT ACCGAAATGC AGGCCGCGCC
ATGCAAACCG AGACATTGAA ATAA
|
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| Protein sequence | MSQALFYVLE STSPAATQPG LLKFVCQLAH YYYSQNARVY ILSDDKEQAL LIDELLWQND
VSEFIPHNLI GEGPKSGSPI EIGWGTLRPS GRRHVLINLA QEVATFAVSF AQVVDFVPCE
EKVKQHARER YKIYRNAGRA MQTETLK
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