Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0523 |
Symbol | |
ID | 6986537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 577288 |
End bp | 578124 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643378901 |
Product | hypothetical protein |
Protein accession | YP_002262044 |
Protein GI | 209694116 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTCAA GAATTCTACT TAATGGGGAA AAGGCCTTAT GGCAGCTATC ACCATTAACA GATACAAGCC TACCGATTAA AGATATTCCG ATCCAACAAG GTGTAGCATT CGCTTATGAT GTGCTTTCTG TCGAAGATGC AAATCATCAA GAGTGGCACT TGATGCGTTT TTTTGATGTG GATGAAACCT TACTGAGCTA CCCTGCGATA GAGTTAGTGA TGAGTGGTGT TTCTCGTTAT GCAGAAGTCA GAATTAACGG TGTGGCGGTA TTTGATTGTA ATGAATTGAT GACGCGTTAT CGTAAGGACA TCAAAGAATA CTTACAGTTA GGAGGCAATC GTTTTGAAAT TCTTTTTCTA GAAGAAGACG ATGAAGACTG GTTGTTAGAT GATAATGAAG TCAGCGGTGT TTGCGAAATA AATCAAGCGT ATTATCGCCG TTTTGGTGCA GTGCAAAGCA TTGATATAAA AGATGACATT GGAGTTTTTG GTGTTTGTTT TTTTCAGCCT ATCCCACACC TTTCTTTAAA TCATATTAGT ATCGAACAAA TTTGGCACCA TGGTTGTGAG TTAAAAGTAG ACGTGCGTTT CCATACGTAT AAACCCAATC TTATTTCTGC CAGTATTAAG TTTGATGGCA TGACATTGAC GCTTCCTGTG GATGTAAGAA GTGATCATGT GTCGGCGTTA TTCCAAGTAG AAGCGCCAAA ATATTGGGAT GATCAAATGC AAAACTCAGA TGATCTCTAT GTAATTGACG TAATACTCGA TGGTCAGCAC CATGAACTTG AAATTGGCTT ATGTCGAACA GAAAATGTGA TTCACTTTCC TTTGTAA
|
Protein sequence | MNSRILLNGE KALWQLSPLT DTSLPIKDIP IQQGVAFAYD VLSVEDANHQ EWHLMRFFDV DETLLSYPAI ELVMSGVSRY AEVRINGVAV FDCNELMTRY RKDIKEYLQL GGNRFEILFL EEDDEDWLLD DNEVSGVCEI NQAYYRRFGA VQSIDIKDDI GVFGVCFFQP IPHLSLNHIS IEQIWHHGCE LKVDVRFHTY KPNLISASIK FDGMTLTLPV DVRSDHVSAL FQVEAPKYWD DQMQNSDDLY VIDVILDGQH HELEIGLCRT ENVIHFPL
|
| |