Gene VSAL_I0518 details

Gene Information

• Locus tag: VSAL_I0518
• Symbol: pyrI
• ID: 6986536
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 572628
• End bp: 573092
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643378896
• Product: aspartate carbamoyltransferase regulatory subunit
• Protein accession: YP_002262039
• Protein GI: 209694111
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG1781] Aspartate carbamoyltransferase, regulatory subunit
• TIGRFAM ID: [TIGR00240] aspartate carbamoyltransferase, regulatory subunit

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAATA AAACTGAATT ACGTGTTGAA GCAATCAAAA ACGGCACCGT TATCGATCAC 
ATTCCTGCAA ATATTGGTGT AAAAGTGCTT AAATTGTTCC AAATGGACAA AACAGCAGAG 
CGTGTGACCA TTGGCTTAAA CTTACCGTCT TCAGCGCTTG GCTCAAAAGA TTTACTGAAA 
ATAGAAAATA CATTTGTCAC ACCAGAACAA GCGAGTAAAT TGGCGTTGTA TGCACCACAC 
GCAACCGTTA ATCAAATTGA GAACTATGAA GTCGTTAAAA AGATACCGCT AATTCTTCCT 
AAGCAAATCA CAGGGGTATT TGAGTGTCCG AACAGCAATT GCATTACTCA TGGTGAGCCA 
GTAGATAGCA GCTTTAAAGT GATAGCTAAG AAAGGAAACA TCCATCTGAA GTGCAAATAT 
TGTGAAAAAG TATACTCTCA AGAAGTCGTG ACCGATTTAC ATTAA 

 

Protein sequence

MSNKTELRVE AIKNGTVIDH IPANIGVKVL KLFQMDKTAE RVTIGLNLPS SALGSKDLLK 
IENTFVTPEQ ASKLALYAPH ATVNQIENYE VVKKIPLILP KQITGVFECP NSNCITHGEP 
VDSSFKVIAK KGNIHLKCKY CEKVYSQEVV TDLH