| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0508 |
|---|
| Symbol | |
|---|
| ID | 6986530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 565801 |
|---|
| End bp | 566442 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643378888 |
|---|
| Product | toluene tolerance protein Ttg2 |
|---|
| Protein accession | YP_002262031 |
|---|
| Protein GI | 209694103 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.477198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTAG GGATGAAAAT CGTAGGGATC ATACTTTCCC TTTTTATTGG TGTCGCTCAA
GCTGAACCGA TTGATAAAAC CAAACCTTAT GAAATGATGA CAAAAGTCTC TGAAGACACT
TTTGCTCGAT TAAAAGCAGA GCAAGTCGCT ATTCAAAAAG ATCCCAATAT ATTAAAAACG
GTCGTTGAAG AAGAATTGAT GCCGTACGTT AATGTAAAGT ATGCCGCGTA TAAATTACTT
GGGCCTCATC TAAAGAAAAC CACGGCAGCA GAAAGAGAAC AATTTGTGAC GGCTTTTCGT
GGCTACCTCG TGTCGTCATA CGCTCAAGTA TTAACGTTAT ATACTGATCA AAAAATCGAA
TTAGAGAAGC CAAAAGCGAT TCCTGAAAAA AAATCTATCA TTAGTGTTCG TGTTGATATT
CTTGATTCAG CTCGTCCAAC GGTAAAAGTA GATTTTAAAT TACGTAAGAA TAAGAAAACA
TCAGAGTGGC AAGCATTTGA TATGGTAGCG GAAGGCGTGA GCTTATTATC GACAAAGCAA
TCTGAATGGA GTGCTAAGAT TCGTAAAGAA GGCATTGAGT CAGTCAGTAA AGAATTAACC
TCATTAGCCG CTCAACCTAT TCGCTTAGAA GGAAGTAAGT AA
|
|---|
| Protein sequence | MKLGMKIVGI ILSLFIGVAQ AEPIDKTKPY EMMTKVSEDT FARLKAEQVA IQKDPNILKT
VVEEELMPYV NVKYAAYKLL GPHLKKTTAA EREQFVTAFR GYLVSSYAQV LTLYTDQKIE
LEKPKAIPEK KSIISVRVDI LDSARPTVKV DFKLRKNKKT SEWQAFDMVA EGVSLLSTKQ
SEWSAKIRKE GIESVSKELT SLAAQPIRLE GSK
|
|---|
| |