| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0506 |
|---|
| Symbol | |
|---|
| ID | 6986528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 564510 |
|---|
| End bp | 565304 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643378886 |
|---|
| Product | toluene tolerance protein Ttg2B |
|---|
| Protein accession | YP_002262029 |
|---|
| Protein GI | 209694101 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.156357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAATT TCTCTTTAAT CTTATTTGTT GAAAATATTG GTAAGCGAGC GCTTTCAACG
TGCGAAGCTA TTGGTCGAGC GACTTTTATG CTTTTTGGGG CGATCATTGC AAAGCCTCAA
CCCGTAAGAA TGTTTCCATT GTTATTGCAA CAGCTGTATT CAGTCGGTGT GTTATCGCTT
GTTATTATCG TGGTCTCTGG GCTGTTTATC GGCATGGTGA TAAGCCTTCA AGGTTATGTG
ATTTTAGTCG ATTACGGTGC AGAAACCAGT CTCGGCCAAT TGGTGTCACT TTCGTTATTA
CGTGAATTAG GCCCTGTGGT TACCGCACTC TTATTTGCTG GGCGTGCCGG CTCTGCATTA
ACTGCAGAAA TAGGGTTAAT GAAAACGACA GAGCAGTTGT CTAGTATGGA AATGATGGCG
ATAGATCCTT TGCGTCGTAT TATTGCCCCG CGCTTATGGG CGGGTGTTAT TTCAATGCCA
TTACTGGCGA TGATTTTTAT GGCTGTGGGT ATATGGGGTG GTCAAATTGT TGGTGTTGAA
TGGAAAGGTA TTGATCACGG AAGCTTTTGG TCAGTAATGC AAGCATCGGT CGATGTACGC
CACGACATTG TTAACAGTTT AATTAAGTGT GTCGTGTTTG CGTTTGTCGT GACATGGATT
GCTTTATTTA ATGGCTATGA TGCGACCCCA ACATCAGAAG GGATCTCATT AGCAACAACA
CGAACGGTAG TGCATTCGTC ACTGGCGGTA TTAGGAATTG ATTTTGTGCT TACAGCACTG
ATGTTTGGGA ATTAA
|
|---|
| Protein sequence | MSNFSLILFV ENIGKRALST CEAIGRATFM LFGAIIAKPQ PVRMFPLLLQ QLYSVGVLSL
VIIVVSGLFI GMVISLQGYV ILVDYGAETS LGQLVSLSLL RELGPVVTAL LFAGRAGSAL
TAEIGLMKTT EQLSSMEMMA IDPLRRIIAP RLWAGVISMP LLAMIFMAVG IWGGQIVGVE
WKGIDHGSFW SVMQASVDVR HDIVNSLIKC VVFAFVVTWI ALFNGYDATP TSEGISLATT
RTVVHSSLAV LGIDFVLTAL MFGN
|
|---|
| |