| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0500 |
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| Symbol | |
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| ID | 6986524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 559768 |
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| End bp | 560268 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643378880 |
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| Product | hypothetical protein |
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| Protein accession | YP_002262023 |
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| Protein GI | 209694095 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.108043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTT CACACGTTAG TCTACTTGCC GGTTTATTAT TCAGTTCTTC AAGTTGGGCA
TTAAGCACCG ATACAGAACA ACCGATTCAT ATTAATTCAG ACACTCAAAA CTTTGATATG
CAAAGTAACA GAGTGACCTT CAACGGTGAT GTTACTTTAA AACAAGGCAG CATTAAGATA
TTTGCAGATA AACTTATTGT TATACGTCCT CAAGGCCAAG AAGGCAGAGA AATTCTTGAA
GCGTACGGAA AGCCAGCTCG TTTTAGTCAA TTAACCGATG ACGGTAAAAC ACTGAGAGGG
AAAGCAAATA AATTGCGTTA TGAGCTAGAA AATGAATTTC TAACAATGAC GGACAATGCT
GAACTAACCC AAGACGACAG TGTTATTCAG GGTAAAGTGA TTACCTATAA TATGAAGACA
CAAAAGTTAA TTGCGGATGG TGGTAAAGAC GAACGAGTCA CTACTATTCT CCAACCTAGT
CAATTGAATA AAAAACAATA A
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| Protein sequence | MKLSHVSLLA GLLFSSSSWA LSTDTEQPIH INSDTQNFDM QSNRVTFNGD VTLKQGSIKI
FADKLIVIRP QGQEGREILE AYGKPARFSQ LTDDGKTLRG KANKLRYELE NEFLTMTDNA
ELTQDDSVIQ GKVITYNMKT QKLIADGGKD ERVTTILQPS QLNKKQ
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