Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0499 |
Symbol | |
ID | 6989185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 559040 |
End bp | 559765 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643378879 |
Product | ABC transport protein, ATP-binding component |
Protein accession | YP_002262022 |
Protein GI | 209694094 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.3926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATAT TAGAAGCAAA AAACCTCGCA AAAACATACG GCAGCCGTAA AGTCGTATCT GATGTAAGCC TAACGGTTGA GTCAGGGAAA ATTGTTGGCC TTCTTGGCCC TAACGGCGCG GGTAAAACAA CGTCTTTCTA TATGATTGTT GGTTTAGTGT CTCGCGATGA AGGCTCTATC ACTATTGATG GTGTCGATAT TTCACTTCAA CCAATGCATA ACCGTTCAAA AATGGGCATT GGCTATTTAC CTCAAGAAGC GTCTATTTTT AGAAAACTGT CCGTATTCGA TAACATCATG GCAGTGCTTC AAACTCGCAA AGATTTATCT AAAGCAGAAC GCTTAGATAA ACTTGAAGAG TTATTGGATG AATTTAATAT TCAGCACATT CGCAACAGTA ACGGCATGGC TCTTTCTGGT GGCGAACGTC GTCGAGTTGA GATCGCTCGT GCATTAGCCG CAAACCCAAA GTTCATTTTA CTTGATGAAC CTTTTGCCGG TGTTGATCCT ATTTCTGTAA TCGACATCAA AAAAATCATT CAACATTTAA GAGACCGAGG GTTAGGTGTG TTAATTACAG ACCACAACGT TCGTGAAACT CTCGATGTGT GTGAACACGC TTATATCGTA AGCCAAGGTC ATATGATTGC AAATGGTACC CCCGAACACG TATTAAATGA TGAACATGTA AAACGCGTTT ATCTTGGTGA TCAATTTAAG TTGTAA
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Protein sequence | MAILEAKNLA KTYGSRKVVS DVSLTVESGK IVGLLGPNGA GKTTSFYMIV GLVSRDEGSI TIDGVDISLQ PMHNRSKMGI GYLPQEASIF RKLSVFDNIM AVLQTRKDLS KAERLDKLEE LLDEFNIQHI RNSNGMALSG GERRRVEIAR ALAANPKFIL LDEPFAGVDP ISVIDIKKII QHLRDRGLGV LITDHNVRET LDVCEHAYIV SQGHMIANGT PEHVLNDEHV KRVYLGDQFK L
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