Gene VSAL_I0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0488 
Symbol 
ID6988298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp545504 
End bp549367 
Gene Length3864 bp 
Protein Length1287 aa 
Translation table11 
GC content39% 
IMG OID643378868 
Producthypothetical protein 
Protein accessionYP_002262011 
Protein GI209694083 
COG category[S] Function unknown 
COG ID[COG3164] Predicted membrane protein 
TIGRFAM ID[TIGR02099] conserved hypothetical protein TIGR02099 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.135683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACTA AGTTAATTCG TACTGAACGT TGCTTGATGG GATTATTGCT GCTGGTATTT 
TTACTGGCAG CATTAGTCAT AACAAGCCTA CGCCTTTTAT TACCTACCTT AAATAAATAC
CAACCAGAAA TTGAACAGTT ACTTTCTCAA TCTACTGGTT TCTCAATCTC AATTGGTGAA
GTAAAAGGGC GCTGGCGAAA TACCAATCCA TCCTTGAATC TGACTAAACT AACAGCAACC
GATCCAAATA CTGGGGATGA AATCATCTCT GTTGGTTCTG TTGAAATTCA ACTGAATATT
CTTTCCTCTC TTTGGGCCCA ACAGCCTCAA TTTGCTGATC TTCGAATCGA TAAATTAACC
GCAGATTTGA CCTCATTAGG TAACGATAAA TCAGAAGAAA ATAAATTAGA AGTTGACGAT
AAAAATACAG AAGACTCACT TTCTAAACGT TTAGAAGATC TCTTTTTAGT CCGATTGAAC
CATTTCTCGA TAAAAAATTC TCACGTTACG TTCACTGCAT TAAATGGCAA TGAAAAAACG
ATCTTAATTG ATTCGTTACA ATGGCGAAAT GAAAGCAGAA AACACCTTGC TGAAGGGGTT
GTGAGTGTTT TAGGCAGCGA AATTAACCAA CTGAAAGTGA TCGCAAACTT TAAAGAGAAA
GGGACTTTCA AAAGTTTAGA TGGTGATTTT TATGTTGAAG CCCAAAATAT CCAAATTACG
CCATGGATAA AAGACAATAT TCAGCAAGAA TATGGGGTTA CTGAAGGTGA GGTATCCGTT
AATGCTTGGC TATCGTTTAA AAATGGACAA CCCATTGATG CGTTAGTTGA AGCGGCTCCT
TCTTATATTA ACTGGGAAGA AGATAAAACG ATCCATAAAT TGAGTATCGA AAGTGGAGTG
TTTGAGCTTC AACCAGAAAA AGAAGGTTGG AAAGTCATTT CATCAGGCAT TCAAATTAAA
CATGAAGACG ATGAATGGCC AGAGCTTGCT GGGAATTTTG TTTGGCAACC GTCTAAATGG
ATACTTAATT TAGGTCATAT TGATCTTGAA AATGCGCTTG GACTCAAAAC ATTATTACCA
GCATCTCAAG ATGAAATCAC GAATTTACTT GGTACTCTTA ACCCTAAAGG GGATATCGAT
GATATTCGAG TTGAGTACGA TGCGACAACG GGACTAAATT ATTCGGCATC CATACATGCT
GCCGGAATGA ACCAGTGGGA ATTACTGCCT GGTTTTCATA AATTAGATAT TCTTGTTGCG
GGCGATGAAA CAAAAGGCAA AGCCGAGCTT TCTTTGGTTG ATGATACGTT GCCTTATGGT
GATGTATTTC AAGCACCTTT GAATATTGAA AATGCAAAGG TAACCGCTTA TTGGAAGGTT
AATGATGAAG GCTGGCGTTT ATGGTCTGAT TATATTGATG TATCAACTCC TGACCTTCAA
GCCAAAGGTG AGTTCCGATT AGACTTCCCT AAAGATAAGC CTTCAGTGTT GTCTTTTTAT
GCAGAAGCTG ATGCGTTTAA TGCAGATCAA ACTTGGCGTT ATCTACCAAC ACTCGCATTA
GGTCAAGACC TTACCGATTA CCTTTCCTCT GCTGTTCAAG GAGGAAGTGC TAAGACGGTA
CAATTACTAT GGTATGGCGA GTTAAGTGAT TTTCCATATA CAAAATATGA CGGTATTTTT
CAAATTAAAG TAGGCCTTAA AGACGCTAAG TTTTCGTTTG ATACTGCTTG GCCTCCATTA
ACTAATTTGC AATTGGATTT GATGTTCCAA AATGCATCGA TGTTCTTAAG TTCACATTCT
GCAGACCTAA TGGGCGTGCA TGCAACCCGA GTAACTGGAC AGATTGCTAA CTTAGCAGAG
GACGGTAAGT TAACGATTAG AGCAAGAGCG AATGGATCTG GTAAAGCGGT TCGTGAATAC
ATGACTGCAA CGCCACTGGT TGATTCTGTG GGGGCGGCAC TTAATAGCAT TCAAATTGAT
AATAGAGTGG ATGCATTATT ACGGTTAGAT ATCCCATTTA ATAGTGAAGA TGTTAGAGCA
TGGGGCTATG CCGATTTAGC GAATAATCAT ATTGAATTGC AATCGCCTAA TATCGAACTT
ACGAATGCAA AAGGTCGTAT TGAATTTGAT AATGATGTAG TGAAAGCAAA GGGGATCAAA
GCCTCTTTAC TAGGACAACC GATCTCATTG TCATTTAATG GTGAAACTCA ATCCGATTTT
TATGGGGTGA ACATTGATGT TAAAGGTAAA TGGAATATTG ATCCTTTAAG GGAATACATT
GATTCGCCGT TAATCGATAA AGTTAAAGGT ACATCAATCT GGGATACCTC GATCAATTTA
CAGATGGCGG ATGTTGGGTT TACTTATCAA ATCGGGATGG ATGCGGCTCT TAACGATATT
CAATCAACGC TTCCATACCC TCTTGCATTA GAGAAAGGGT CAACGGATAA AGCGGTATTA
CAGGTCTCGG GTAATGCTGA ACGGTTATCT GGACGCTTAA TTTTTCCTGA TGCAAAGTAC
CAAGCTGAGA TTAGCATTGA TAAAGAAACG CCAGTGATTG ATGCAAGTTA TCTTATTGTT
GGGCGTGGAA ACTTTAAAGT CAGTCCAATT GTCGGTCACT CTGCGTCATT AAATACGAAG
AACTTAGATG CGGATGCTTG GATTGAAGAG CCTATTCAAA GTAAAGAAAA ACCAAGCTCT
GGTTCAAAAA GTAAAGCGAG TAGTTTTCCG GTTATTCCAA TGCCAACACG GATTGATACC
GATATTAAAT CGTTGCGTTT GGCGAGTATA GATTGGAATG ATGTAAATGC TGATATTCGT
AAAAAATCAC AAGGTTGGTA TTTTCAGGTT CAAAGCCAAG AAGTTGATGG TAAAGCAACA
TGGAAGAATA ACGAAGCACT GGCGGTGCAA CTCGATAATC TACATATTTT CATTCCCAGC
TTAGATAATG TTGATAGCGA AGGAGGGCTT AATTACGCAA AAGCAAAAGA TCCATTGATC
TCTTCTTTTG ATCGTGAATT CTTTAAATTA ATGCCCAACT TAGAGTTAAC AATTAAAGAT
ACTTGGGTTC AAGGGTATAA ACTGGGTAAA GTTGAAACAA AGCTGCATAA AAAGAATGAT
ACTTTTTATT TAGATACGTT AAACATTGTC AGTGGAAAGA ATAAGTTTTC AATGACTGGT
GATTGGAAAT TAAATAAAGA GAGCAGTAAA TCGTCTTTTT CAGCAAACGC CTCGGGTGAT
GATAACTCTG AATTATTAGC ACGCTTTGGT ATTAGTACTG GCATTCAAAA CGCGACTTAT
ACAATGTCGG CTAACCTAAA TTGGGATGGC GCGCCTTGGC GAATTAAGAC AAATACTTTA
GCGGGTGATC TTGCGTCTAC CTTGGATGAA GGTGTGATTA CCGACGTGAA GGGGGCTGCT
CGTTTTCTTG GTTTATTTAG TATGGATTCT ATTATTCGTA AAATGAAACT CGATTTTAGA
GATGTTTTTG ATGATGGGAT GGCATTTAAC TCGATAACTG GCAGTGGAGA AATGCGTAAA
GGCGTCTTTG TTAGTAATAA TTTAGTGATG GATGCGGTTG CTGGTGAAAT GAAGATAAAA
GGCAAAGCGG ATTTGAATAC TCGTTTAGTT GATGCAGAAG TTAACTTTAC GCCGGATCTA
ACCTCGGGTA TTCCTATTAT CACGGCATTT GCGGTTGCGC CACAAACGGC TATTATTGTA
CTTGCGGTCG CCACCGCTAT TTCACCGGTT ATTGATGTTA TTACTCAAGT GAACTATAAA
GTGGAAGGGC CTTTAGATGC CCCTACGGTT AAAGAATTAT CTCGAAGCCA AGGTGAATAT
AAGCTTCCTG AGTCAAATGA ATAA
 
Protein sequence
MTTKLIRTER CLMGLLLLVF LLAALVITSL RLLLPTLNKY QPEIEQLLSQ STGFSISIGE 
VKGRWRNTNP SLNLTKLTAT DPNTGDEIIS VGSVEIQLNI LSSLWAQQPQ FADLRIDKLT
ADLTSLGNDK SEENKLEVDD KNTEDSLSKR LEDLFLVRLN HFSIKNSHVT FTALNGNEKT
ILIDSLQWRN ESRKHLAEGV VSVLGSEINQ LKVIANFKEK GTFKSLDGDF YVEAQNIQIT
PWIKDNIQQE YGVTEGEVSV NAWLSFKNGQ PIDALVEAAP SYINWEEDKT IHKLSIESGV
FELQPEKEGW KVISSGIQIK HEDDEWPELA GNFVWQPSKW ILNLGHIDLE NALGLKTLLP
ASQDEITNLL GTLNPKGDID DIRVEYDATT GLNYSASIHA AGMNQWELLP GFHKLDILVA
GDETKGKAEL SLVDDTLPYG DVFQAPLNIE NAKVTAYWKV NDEGWRLWSD YIDVSTPDLQ
AKGEFRLDFP KDKPSVLSFY AEADAFNADQ TWRYLPTLAL GQDLTDYLSS AVQGGSAKTV
QLLWYGELSD FPYTKYDGIF QIKVGLKDAK FSFDTAWPPL TNLQLDLMFQ NASMFLSSHS
ADLMGVHATR VTGQIANLAE DGKLTIRARA NGSGKAVREY MTATPLVDSV GAALNSIQID
NRVDALLRLD IPFNSEDVRA WGYADLANNH IELQSPNIEL TNAKGRIEFD NDVVKAKGIK
ASLLGQPISL SFNGETQSDF YGVNIDVKGK WNIDPLREYI DSPLIDKVKG TSIWDTSINL
QMADVGFTYQ IGMDAALNDI QSTLPYPLAL EKGSTDKAVL QVSGNAERLS GRLIFPDAKY
QAEISIDKET PVIDASYLIV GRGNFKVSPI VGHSASLNTK NLDADAWIEE PIQSKEKPSS
GSKSKASSFP VIPMPTRIDT DIKSLRLASI DWNDVNADIR KKSQGWYFQV QSQEVDGKAT
WKNNEALAVQ LDNLHIFIPS LDNVDSEGGL NYAKAKDPLI SSFDREFFKL MPNLELTIKD
TWVQGYKLGK VETKLHKKND TFYLDTLNIV SGKNKFSMTG DWKLNKESSK SSFSANASGD
DNSELLARFG ISTGIQNATY TMSANLNWDG APWRIKTNTL AGDLASTLDE GVITDVKGAA
RFLGLFSMDS IIRKMKLDFR DVFDDGMAFN SITGSGEMRK GVFVSNNLVM DAVAGEMKIK
GKADLNTRLV DAEVNFTPDL TSGIPIITAF AVAPQTAIIV LAVATAISPV IDVITQVNYK
VEGPLDAPTV KELSRSQGEY KLPESNE