| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0484 |
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| Symbol | mreC |
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| ID | 6988832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 542080 |
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| End bp | 542937 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643378864 |
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| Product | rod shape-determining protein MreC |
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| Protein accession | YP_002262007 |
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| Protein GI | 209694079 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1792] Cell shape-determining protein |
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| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0116086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTCCAA TCTTTGGTAG AGGTCCCTCT CTACAGCTTC GCCTGTTTAT TGCTGTAATG
GTATCGGCTA GCCTTATGTT AGCCGATAGT CGTTTAAATG CCTTTTCTGA CATACGTTAC
CTATTAAATA GTTTTGTTTC TCCAATTCAT TATGCGGCGA ATCTGCCTCG TACTATGTTT
GATGGCATGT ATGAGCGTTT CAATAGCCGT AATGCACTCA TGTTTGAAAA TCAGAAACTC
AAACAAGACA TGTTTATACA AAACAGCAAT TTATTGTTGT TGGAGCAATT AAAGCAAGAA
AATAGTCGAT TACGTGATTT GCTTGGTTCC CCTTTTATTC GTGATGAAAA AAAGTTGGTG
ACAGAGGTAA TGGCTGTGGA TTCTGCACCC TATACCCACC AAGTAATGAT AGATAAAGGC
CAAGTTGACG GTGTCTATGA AGGGCAGCCA GTTATTAGTG ATAAAGGTAT TGTTGGGCAA
ATTAACTACG TAGGTGCACA TAATAGTCGC GTGCTGTTGT TAACCGATCC TAACAATGCG
ATTCCTGTAC AAGTAGTTCG AAATGATATT CGTGTTATTG CATCAGGAAA AGGTAATTTA
AATTTAATGC AACTTGAGCA TATACCAACA AATACTGATA TTGAAATTGG TGATTTATTG
GTGAGCTCAG GTTTAGGTGG GCGATATCCT GAAGGGTATC CTGTCGGTTA CATTTCTAGT
ATAGATAATA ATAATAAACG CCCTTTTGCA TCGATAGAAT TAGAAACTGC GGTTGAATTT
GATAAATTAA GATATTTATT ACTCGTATGG CCAACAGAAA TTGAAGGTAA GATAAAGGAA
GTGACTAATG ACGAGTAG
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| Protein sequence | MTPIFGRGPS LQLRLFIAVM VSASLMLADS RLNAFSDIRY LLNSFVSPIH YAANLPRTMF
DGMYERFNSR NALMFENQKL KQDMFIQNSN LLLLEQLKQE NSRLRDLLGS PFIRDEKKLV
TEVMAVDSAP YTHQVMIDKG QVDGVYEGQP VISDKGIVGQ INYVGAHNSR VLLLTDPNNA
IPVQVVRNDI RVIASGKGNL NLMQLEHIPT NTDIEIGDLL VSSGLGGRYP EGYPVGYISS
IDNNNKRPFA SIELETAVEF DKLRYLLLVW PTEIEGKIKE VTNDE
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