Gene VSAL_I0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0473 
SymbolmshG 
ID6988842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp530410 
End bp531636 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content41% 
IMG OID643378854 
Producttype IV pilus, mannose-sensitive hemagglutinin protein 
Protein accessionYP_002261997 
Protein GI209694069 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.615107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATGT TTAAATACAG TGGTCGAAAT GCACGTGGCA TACAAGTGTC TGGTCGTGTT 
GAATCGGTTT CTCAAGAAGG GGCTGCTGAG CAATTGATGA ATGAAGGGAT TATCCCAACC
TCCATTGTTG CGAGTAAGTT TGGCTCTTCA TCAAGTACGT TAGATTGGAA GAAATGGTTT
CAACCTAATA TTCCTTTAGA TGTATTAGTG ATTTTTTGTC GTCAAATGTA CAGCTTAACT
AAAGCGGGTG TGCCGCTATT ACGTGCAATG AATGGGTTAT CACAAAACAG CAGCAATAAG
ATATTAAAAA AAGCATTGGA CGAAGTAACC AGTGACTTAA CCAATGGCCG CAGTTTGTCT
GTGTCTATGC AGCAGCATCC TCATGTGTTT AGTTCACTTT TTGTCTCTAT GATTCATGTG
GGAGAGAATA CGGGTCGTTT AGATCAGGCT CTGATGCAGT TAGCGAGCTA CTACGAACAA
GAAATGGAAA CACGTAAGCG AATCAAATCT GCCATGCGTT ATCCTATTTT TGTTCTGAGT
TTTATCTTAC TGGCGATGTT TGTATTGAAC GTTAAAGTGA TTCCACAGTT TACGAGTATG
TTTGCTCGCT TTGGGGTTGA ACTGCCTTTA CCTACTCGAA TATTAATGGC GACATCCAGT
TTCTTTGTTA ATTATTGGCA TGTGCTAATC GCCGCAATGG CGGGGGCATT TTGTGCTTTT
CAAGCTTGGA TTAGTCGAGA TGACGGAAGA GAAAAGTGGG ATAAGTTTCG TTTAAAGGTG
CCAATTGTGG GAGATATTGT CACTCGGGCA CAAATGTCGC GTTTTTCTCG TACCTTTGCA
TTGATGCTTA AATCGGGTGT TCCATTGAAT CAATCGTTAG CGCTTTCTGC CGAAGCACTA
GGAAATAAGT ATTTAGAAAA TCGTTTATTA GAAATGAAAA ACGGCATTGA ATCGGGCACC
AGTATGTCGG CAACTGCGGC GCAAAGCGGT ATTTTCACTC CGCTTGTTCA ACAGATGATT
GCGGTTGGTG AAGAAACTGG ACAAATAGAT GATCTCTTAC TGGAAGTCTC CGATTTCTAT
GACAGAGAAG TCGATTATGA TTTAAGAACA TTAACCGCCA GAATTGAGCC TTTACTTTTG
GTTGTTGTGG CCGGAATGGT CTTAATTTTA GCGTTGGGTA TTTTCTTACC AATGTGGAAT
ATGTTGGATG TAGTGAAGGG TTCATAA
 
Protein sequence
MAMFKYSGRN ARGIQVSGRV ESVSQEGAAE QLMNEGIIPT SIVASKFGSS SSTLDWKKWF 
QPNIPLDVLV IFCRQMYSLT KAGVPLLRAM NGLSQNSSNK ILKKALDEVT SDLTNGRSLS
VSMQQHPHVF SSLFVSMIHV GENTGRLDQA LMQLASYYEQ EMETRKRIKS AMRYPIFVLS
FILLAMFVLN VKVIPQFTSM FARFGVELPL PTRILMATSS FFVNYWHVLI AAMAGAFCAF
QAWISRDDGR EKWDKFRLKV PIVGDIVTRA QMSRFSRTFA LMLKSGVPLN QSLALSAEAL
GNKYLENRLL EMKNGIESGT SMSATAAQSG IFTPLVQQMI AVGEETGQID DLLLEVSDFY
DREVDYDLRT LTARIEPLLL VVVAGMVLIL ALGIFLPMWN MLDVVKGS