| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0471 |
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| Symbol | mshN |
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| ID | 6988848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 527603 |
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| End bp | 528676 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643378853 |
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| Product | type IV pilus, mannose-sensitive hemagglutinin D (MSHN) |
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| Protein accession | YP_002261996 |
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| Protein GI | 209694068 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0436928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGTCA CCAATAAAGC TCTATTGAAT ATCACTAAAG CAAAATCAGA TGTTGAGAAT
ACATCGACGA TTTCGCCTGC GATAGTGCCA AATATGGAAT CAAGATTTAA AGCGCCTTTC
TTTTTTGCTA TTGGTTTATT AAGTTCAATT TCAGTTCTCG GTTGGGCTAC GTTAAATAAC
GAGCCAACAC CGGTTACGAC TCCCATCGCT AATGATGCAG CGGTCGTTGA GTTAGCCTCC
AATTCTCCGA CAAAAAACAG CACACCTGAA TCCGTCAGTT CGATTTATTT ATCTGAAAGC
CGTGATAAAA CGGAAAAGCA GGCAGCAAAA ATAACGACTC CAGTGCCGAC TGCAATTATT
AAGACGGCAT CAACAGCAGA AAAACCAACA GTAAAGAATG AAAATACGGT ACCAGTCATT
TCTACTAAGC AGAACGTTAA GTCTGAAAGT GATGCATTTT ATGTCGAAGA AGTTGAGTTG
TTACCTTCTG AATTAGCAGA GAAAAGTAGA TCCGCAGCGA GAAAAGCACT TGATGAATCG
GATTTTAAAC AAGCCATTCT TGAGTACTAT ACCGTACTTA AATATCAGCC AAGAGATGAC
GATTCACGTA AGAAGTTAGC TGCATTACTC TATGGTAAGC ATCAAGTGAA AGAAGCGGCG
GTCGTTTTGC AGCAGGGAAT AAAGCTAGAT AATGACAGCG TGACTTTGCG TTTAGCGTTG
GCAAGTTTAT TACAAAGAGA AGAGCAGCCA GAAGCGGCGT TATCTGTTGT CGAATACATT
CCTTTAGAAG CCTCTATTGA TTATTTAGCC ACGCGTGGTG GGTTAGCTCA ACAATTAAAA
TTTATCGATT TAGCAAAAGA AAGCTATCAA ATGCTCGTCA ATAAAGACCC TGATAATGGT
CGTTGGTGGT TAGGTCTTGC CATTGTTTAT GAGAGAGAAG CAGAGATTGA TAAAGCTTAT
GATACTTATC AATCAGCATT GATTAAGCCG GGCTTATCCC GCTCATCTCA AGTGTTTGTT
CGAGACCGAA TTAAGTTATT AGAGACAATG AAGGAAGTGA ATAATGCGTC TTAA
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| Protein sequence | MSVTNKALLN ITKAKSDVEN TSTISPAIVP NMESRFKAPF FFAIGLLSSI SVLGWATLNN
EPTPVTTPIA NDAAVVELAS NSPTKNSTPE SVSSIYLSES RDKTEKQAAK ITTPVPTAII
KTASTAEKPT VKNENTVPVI STKQNVKSES DAFYVEEVEL LPSELAEKSR SAARKALDES
DFKQAILEYY TVLKYQPRDD DSRKKLAALL YGKHQVKEAA VVLQQGIKLD NDSVTLRLAL
ASLLQREEQP EAALSVVEYI PLEASIDYLA TRGGLAQQLK FIDLAKESYQ MLVNKDPDNG
RWWLGLAIVY EREAEIDKAY DTYQSALIKP GLSRSSQVFV RDRIKLLETM KEVNNAS
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