Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0461 |
Symbol | ssb |
ID | 6989416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 517928 |
End bp | 518479 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643378843 |
Product | single-stranded DNA-binding protein |
Protein accession | YP_002261986 |
Protein GI | 209694058 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGCC GTGGTATTAA TAAAGTTATC CTTGTTGGTA ACTTAGGGCA AGATCCTGAA ATCCGTTACA TGCCAAGTGG CGGTGCGGTA GCAAACATTA CAATTGCAAC GTCGGAATCA TGGCGTGATA AAGCAACTGG CGAACAACGT GAAAAAACAG AATGGCACCG TGTTGCTCTG TTTGGTAAAT TAGCGGAAGT TGCTGGTGAG TATTTACGTA AAGGCTCTCA AGTTTATGTT GAAGGTCAAT TACAAACACG TAAATGGCAA GATCAGAGCG GTCAAGATCG TTTTACTACA GAAGTTGTAG TTCAAGGTTT TAACGGTGTA ATGCAGATGC TTGGTGGTCG TGGTCAAGGT CAAGGCGCTC CAGCTGGTGG ACAGCAGCAA CAGCAGCAAG GCAATTGGGG TCAACCTCAA CAACCTGCGC AGCAAAATAA CTTTGCTCCA CAACAGCAGC AACAACAAGC ACCTCAACAA CAAGCACCGC AGGCAGCTCA GCCTCAATAT AATGAGCCAC CAATGGACTT TGATGATGAT ATTCCATTTT AG
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Protein sequence | MASRGINKVI LVGNLGQDPE IRYMPSGGAV ANITIATSES WRDKATGEQR EKTEWHRVAL FGKLAEVAGE YLRKGSQVYV EGQLQTRKWQ DQSGQDRFTT EVVVQGFNGV MQMLGGRGQG QGAPAGGQQQ QQQGNWGQPQ QPAQQNNFAP QQQQQQAPQQ QAPQAAQPQY NEPPMDFDDD IPF
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