| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0446 |
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| Symbol | |
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| ID | 6986501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 498845 |
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| End bp | 500602 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643378830 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_002261973 |
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| Protein GI | 209694045 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCT TACTTACTCA GGGAACTCAA CTCGAAGCAA GAAAAATAAA AAAACCACTT
ACTAAATCTT TTCTCGTTAG CCTCAGTATT CTATTTTTTG TTTGTGCTCA CTTTTTCCAA
CCAAATCCAG GTGGATCAGG TCTCCATTTA GCCTTTAATG CTGCCTCTTG GATCCCTGCA
AGTATTGCCA TTGCCATTGC CTTCTATCAT ATAGCGAAAC AAGGGCTAAT TAAGTATTCA
ACATTAACAA TCGTTTTGTT TTTCTCAGCA GTTCTACTTT CTGTACCTTT AATCTATCAA
GACTCCTCTC CATTATTAGC CGCTGGAAAA TTTTTTGGAT TATGGGCTGG CTGGCTTTTC
TTTCTCACCT TACAACAATT TGCATTTTCT AATAAACAAA AGCAATGGCT TCTATGGTGC
ATCATTGGTT CTGTATTGAT TGAAGCTATT TTTGGCTATA TTCAATATCT ATTTCTAGAA
TCAGGGAATT CGTTTGGTTA TAACGTAATT TCAAACCGCC CTTATGGTAT TTTTCAGCAA
CCAAATGTAA TGGCAAGCTT TTTAGTTACC GGGCTTGCCA TAGCCTCGTA TTTTTTGGCA
AGACAACCAA TTAAATACCG AGAGAACCCT GTCGCCCTTA CGCTTTTATA TATAACAATA
ATCCTAACCT TACCGCTAAT TATTGTTTTA GCTTCACGAA CGGGTTGGAT TGCTGCGGTA
TTTAGCCTTC TATTGTTAAT CCCATACATG TGGAAATATT GCACAAAAAA ACGATTTTCC
TCGTGGGTTC TTGCTTTAAT TATGGGCGTT AGTGGCAGTT TTGTTATCTT ACATTTTTCA
CAAAATGATG ATTTCAATAA TATTTCATTA TTAAGTAAAA AAGCAGATTT AGAAAGTCCA
AGAAGATACA CATTCCCCCA AGCACTGGAT ATGTTTTTAG AGAAACCAAT TACTGGCTAT
GGGAATTTTG AAGCCGCTTA CATTCTTTAT ACGGCCAAAC AGCACCAAAT ATCTGCCGAT
TATAAATCGG GATTACCATC AATGGACCAT CCTCATAATG AGGTCCTCTA CTGGGGAGTA
GAAGGCGGCA TTCTTGCTAT ATTTGGATTA TTATTAGCCG CTGGTGGGGT GTTACTAAAA
ATTAGAAAAA GTAAATTAGA TACACAATTT GCATTGCTTG CTCTAATCAG TCCTATCTTT
ATTCACAGCC AATTAGAATA CCCTTTTTAC CATTCTATGC TTCACTGGTT TACCTTCATT
ATCCTTCTCT TTTGGATAGA CCAGCTTAGC TGTAAGTATA AAAAATACCG CATTACTGGA
GTCAGCAAAA TATCGTTACG AGTAAGTTCT CTTGTTCTTC CTATTATCAC TGCTTTTTAT
ATGCTTTCAA CATTACACAC GAACTGGATT TTAACCAAAT TTGAAACAAC AAAACCAATG
AATCCAGAAA TATTAAATCA AGTCAGTAAT CCTGTCGTAT GGGAAGATAG ATTTAATTGG
GATGTATTAT CAGCACAATT ATCCATTGGC GTCATCAATA AAAGACCCGA TTTAATCATA
CCTTACATTA CTTGGTCCAA AGAGCTTATA AAAAATAAAC CTAGACCAGC ATTTTATCAA
AACCTAATCA TCGCTTATCA AGCTTTAGAG CAAGAAGCAA ACGCGGAAGA CATAAGAAGA
GAAGCCGTAT TCTTATTTCC GAATAACAAT TTCGAAACCG TTCAACTTGA CCAAAAGTTA
CGTCAAATCA GAAAGTAA
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| Protein sequence | MATLLTQGTQ LEARKIKKPL TKSFLVSLSI LFFVCAHFFQ PNPGGSGLHL AFNAASWIPA
SIAIAIAFYH IAKQGLIKYS TLTIVLFFSA VLLSVPLIYQ DSSPLLAAGK FFGLWAGWLF
FLTLQQFAFS NKQKQWLLWC IIGSVLIEAI FGYIQYLFLE SGNSFGYNVI SNRPYGIFQQ
PNVMASFLVT GLAIASYFLA RQPIKYRENP VALTLLYITI ILTLPLIIVL ASRTGWIAAV
FSLLLLIPYM WKYCTKKRFS SWVLALIMGV SGSFVILHFS QNDDFNNISL LSKKADLESP
RRYTFPQALD MFLEKPITGY GNFEAAYILY TAKQHQISAD YKSGLPSMDH PHNEVLYWGV
EGGILAIFGL LLAAGGVLLK IRKSKLDTQF ALLALISPIF IHSQLEYPFY HSMLHWFTFI
ILLFWIDQLS CKYKKYRITG VSKISLRVSS LVLPIITAFY MLSTLHTNWI LTKFETTKPM
NPEILNQVSN PVVWEDRFNW DVLSAQLSIG VINKRPDLII PYITWSKELI KNKPRPAFYQ
NLIIAYQALE QEANAEDIRR EAVFLFPNNN FETVQLDQKL RQIRK
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