| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0433 |
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| Symbol | |
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| ID | 6988852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 467761 |
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| End bp | 469482 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643378809 |
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| Product | surface antigen protein |
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| Protein accession | YP_002261962 |
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| Protein GI | 209694034 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0183436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGA AGTTATCCCT CTTTTTTACA TTTTGTTTGT TTGCCATTTC ATCTAACGTG
TCGGCAGAAA CAGAATTGGA TATAGAGGGT TTAGAAGGAT CTTTACTGAG TAATGTAGAA
GCTTACATCT CAGGTATTCC AGAAGAGGAC TATTCCGTAT CTCTTCGTTT CCAAGCTCGC
CTTGAAGAAA GTACGACTGA TGCCTTAAAA GCACTGGGTT ATTACCAACC CGTGATCACC
TTCACTATTG AAGGTGAAAA ATCAAAACAC ACACTTATTA TGACGGTTGA GGAAGGCGAG
CCCGTTGTTA TTTACGTCAG TGATATCGTT ATTACGGGTG AAGCAAGGAA CGATATTGAC
TTTACTAATG CGGTTGATAG TTCAGGTCTC AATTTAGGGC AAGTTTTAAA CCATGGTCGA
TACGAAAGTT TAAAAAGTAC ACTGCAAAAT CTAGCGTTAA GAAAAGGGTA TTTTGATGGT
GAATTTTCGG TTAGTCGTTT AGAGGTAGCT CCTGGAAGAC ATCAAGCAAT GGTTCGCTTA
CGTTATGATA GTGGTAAGCG TTATAGTTTT GGTGAAACGA CGATCGATGG CAGTCAAGTT
GAAGAAAAGC GAGTGCGTTC GATAATTCCT TTTGAGCCAG GTGACCCTTA TCTTGCTAGT
CTGGTTGGTG ATTTAAATCA ATCCCTTTCA AATACTGAAT GGTTTTCATC CGTTTATGTT
GAACCTGATT TAGATGCTGT TGGTGAAACT CATCAATTAC CAATGAAAGT TCATGTCTCT
CCTCAAGTTA GAAATCAATT AGAAACCAGT ATTGGTTATT CGACAGATGT CGGCGCGAGA
GGGAAAATTC GATGGAAAAA CCCGTGGTTA AATAAATATG GTCACAGTTT AGATACTGCA
CTTTCTATCT CTAAGCCAGA ACAAGAAGCG AGGATCTCTT ATAAGATCCC TTTAGAGCAA
GTATTAAAAG ATTATTACAT TGTGAAATAT GGTCTTAAAA ATGTGGATAA CCGAGATACT
GACAGTTTGG AGTCGAATTT AGCGTTTGAA AGGCACTGGG TTTATGACTC TGGTTGGCAT
CGCACTATTT ATACTCGTTT CTTATATGAA GAATTTACGC AAGGCATCCA AGATGGGACT
GCTTGGCTAG TGCTTCCTGG TATCTCATTC TCTAAAAGTC GCACTCGTGG TGGAACAATG
CCGATGTGGG GGGATAAAAA AGCATTCACT ATTGAAGGTA CTGATGAAGC ATTAACGTCA
GACGTAAGAA TGCTTCGCCT ACAAGCCCAA GGAGCGATTG TTCGTAGTAT TGGGGAAAAC
CATCGAGGTG TTGCACGAGC CGATATTGGT GCAATATATA CCGATGATTT CTACAAATTA
CCCCCATCGA TTCGATTCTT TGCTGGTGGT GATAATAGTA TTCGTGGTTA CGGATATGAA
GAAGTATCAC CAAAAGACAG CAGTGGTTAT TTAACTGGCG GACAATTTAT GGCAACAACC
AGTCTTGAGT ATCAATATCG AGTTGTGGGT AATTGGTGGT TGGCGACATT TATTGATTAT
GGTGATGCTT GGATAACAAC TCCAGATTGG AAAACGGGTG CAGGTTTAGG TATTCGATGG
GCTTCTCCTG TAGGGCCAGT TCGACTTGAT TTTGCGTGGG GGTTTGATGC TGAACCTGGT
GATGAATTTA AAATCCATTT TACGTTAGGA CCTGAAGTAT GA
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| Protein sequence | MTKKLSLFFT FCLFAISSNV SAETELDIEG LEGSLLSNVE AYISGIPEED YSVSLRFQAR
LEESTTDALK ALGYYQPVIT FTIEGEKSKH TLIMTVEEGE PVVIYVSDIV ITGEARNDID
FTNAVDSSGL NLGQVLNHGR YESLKSTLQN LALRKGYFDG EFSVSRLEVA PGRHQAMVRL
RYDSGKRYSF GETTIDGSQV EEKRVRSIIP FEPGDPYLAS LVGDLNQSLS NTEWFSSVYV
EPDLDAVGET HQLPMKVHVS PQVRNQLETS IGYSTDVGAR GKIRWKNPWL NKYGHSLDTA
LSISKPEQEA RISYKIPLEQ VLKDYYIVKY GLKNVDNRDT DSLESNLAFE RHWVYDSGWH
RTIYTRFLYE EFTQGIQDGT AWLVLPGISF SKSRTRGGTM PMWGDKKAFT IEGTDEALTS
DVRMLRLQAQ GAIVRSIGEN HRGVARADIG AIYTDDFYKL PPSIRFFAGG DNSIRGYGYE
EVSPKDSSGY LTGGQFMATT SLEYQYRVVG NWWLATFIDY GDAWITTPDW KTGAGLGIRW
ASPVGPVRLD FAWGFDAEPG DEFKIHFTLG PEV
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