| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0432 |
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| Symbol | msrA |
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| ID | 6986490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 467069 |
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| End bp | 467719 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643378808 |
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| Product | peptide methionine sulfoxide reductase MSRA |
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| Protein accession | YP_002261961 |
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| Protein GI | 209694033 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0225] Peptide methionine sulfoxide reductase |
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| TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.025885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAATTT ACTCGTTTTA TAGAGTAGCA CAAGGCAAAT GTCTTCTAAA TTACTCAGTT
AAAGGATGCG ACATGACGAT GGAAAAACAC ACAGTACAGC CACTACATTT TATTTCTCAG
CATGATATAG AATCAATTCC TACTGGTTGT GAGCAAATAC TCTTTGGCAT GGGATGCTTT
TGGGGTACTG AACGTTTATT TTGGAAACTA ACTGGCGTTT ACTCCACAGC AGTAGGTTAC
AGCGGTGGTA AAACCAAGAT CCCAACATAC AAAGACGTTT GCTCAGGTTC AACTGACCAC
GTAGAAGTCG TCAAAGTAGT TTTTAACCCG GCGCTCATTT CCTTAGAAGA ATTGCTTCAC
TCTTTTTGGC AAACGCATAA CCCAACCCAA GGAATGCGCC AAGGAAATGA TATTGGAACT
CAATATAGAT CCGTTATTTA CACCTATGAT AAAAACCAGC AAGAAATAGC AACACACACG
AAAAAACAAT ACCAACACGC TCTATCTCAA CAGGGAATAG AAGAACCAAT AACAACCGAG
ATTACTCCTG CAAATGATTT TTATTTCGCA GAAGAATACC ATCAACAATA TTTAGCCAAA
AATCCAAATG GTTACTGTGG ATTAAGCGGA ACTGGCGTGT GTTTTCTTTA A
|
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| Protein sequence | MVIYSFYRVA QGKCLLNYSV KGCDMTMEKH TVQPLHFISQ HDIESIPTGC EQILFGMGCF
WGTERLFWKL TGVYSTAVGY SGGKTKIPTY KDVCSGSTDH VEVVKVVFNP ALISLEELLH
SFWQTHNPTQ GMRQGNDIGT QYRSVIYTYD KNQQEIATHT KKQYQHALSQ QGIEEPITTE
ITPANDFYFA EEYHQQYLAK NPNGYCGLSG TGVCFL
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