| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0411 |
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| Symbol | |
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| ID | 6986473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 447735 |
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| End bp | 449507 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643378787 |
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| Product | hemolysin |
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| Protein accession | YP_002261940 |
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| Protein GI | 209694012 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3176] Putative hemolysin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.517825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGACGA GTCCATTTCG ACTTCCTAGA GTGACTCCTT TTGGCCTTGG TGAATCTTTT
GCCGAATGGG TAACGGGGTT AAATCGGTTA GATACACATT ATCAAGAGCG ACCTAAAGGG
CTAAACAGTT TTGAATTTAT GCGCTACACG CTTCAATGTT TAGATGTCAC GTATGATATT
CATCAAGGCG AATTAGACTC TATTCCGACG ACAGGCCCTG TTGTTATTGT CGCAAATCAC
CCATTAGGCG CCTTAGAAGG CGTGATATTA GCAGAGATGG TAGGACGCGT TCGACCAGAC
GTAAAAGTAC TGGCTAATGA ATATTTAAAA CAGATACCAG AGATCAGCGA ATTATTTATT
GGCGTCGATG TATTTGAAAC AAAACAAGCC AAAAAGACCA ATGCCAACGC ACTGCGTGAA
GCCCATCAGC ACCTAGCAAA TAACGGGGTA TTAATTATTT TCCCTGCGGG GGAAGTCTCT
ACCTATAATA AAGAAACAAA ATTATTATCA GACAAACGAT GGAGCTATTC CGCCACCAAA
TTTATACAGA AACATAACGC CACCACGGTT CCCATTTATA TTGATGGACG AAATAGCCAC
ACCTTTTACC TTGCAGGAAA AATTCACCCA CTATTAAGAA CATTAATGCT GGGACGAGAG
ATGCTCAATA AAAAAGAAAA TACGATTAAT CTATCGATCG GCAACCCTAT TTCTCATAAA
GAACTGTCAG GATTTAATTC CCCGATTGAA ACCATTAATT ATTTAAGACT AAATACCTAT
TTACTCGCAA CCAATACAGA CCAAACGCCT CAACCAGAAG TGAAAGCCAC CGCATTATCG
CCAATAATGC CCGCCATTAA TGCCGATATT TTAGAAAAAG AAATACATGG ATTACCTGAG
AGCGCAAAAC TATTAGAACA AAGTGGCCTT GCCGTTTATT GCACCAAAAG CCAATTCATT
CCAGCGGTGA TTCAAGAAAT TGGACGAATT AGAGAGGTCA CCTTCAGAGA CGTCGGTGAA
GGAACCGGAC TGTCTTGTGA TTTAGATGAA TACGATACCC ACTACTATCA TCTTTTTATT
TGGCATCAAG AAAATAAAGA AATCGTTGGA TCTTACCGAT TAGGATTAGT CGATGAATTA
ATTGAAGAAT TTGGACTTGA TGGTTTGTAC TCTCGCAGTT TATTCAACTA CCAACAACCC
TTCATTAATA CATTACACAA TTCGATAGAA GTAGGACGCT CTGTGGTTGC CAAAAAATAC
CAGCGCAATG TCAGTTCATT ACTTTTATTA TGGAAAGGGA TCTCAACCTT TGTTTATCAA
CGTCCTCAAT ACACTCATTT GTTTGGCCCA GTCAGTATCA GCAATGACTA CAGCTTATCT
GCACGCCAAT TAATTGCATC AACGCTGACT ATTCATCATT ACGATAATGA AAAAGCGGCA
TTAGTATCCG CAACCACTCC CCTTAAACCG ATAATAAAAA AAGTATGGAA TGGCGATATG
CTTTCTCTAC TGGGTGATTT AAAACTGCTA TCAAAAGTAT TAAGTCGTAT CGAAAAAGGA
AAAGGCTTAC CCGTTTTACT TCGCCAATAC ATCGGACTCA ATGGTAAGTT AATTTGCTTT
AATGTTGATC CAGATTTTAA TGACGCTTTG GATGGATTAA TTGTGGTCGA TATGAGTAAT
GTTCCACACA AAACATTAAG TAAATACATG GGGAAAGAAG AAGCAATGTG CTACCTTGAA
AAACACAATC GCAACAACAT ACACTCGAAA TGA
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| Protein sequence | MVTSPFRLPR VTPFGLGESF AEWVTGLNRL DTHYQERPKG LNSFEFMRYT LQCLDVTYDI
HQGELDSIPT TGPVVIVANH PLGALEGVIL AEMVGRVRPD VKVLANEYLK QIPEISELFI
GVDVFETKQA KKTNANALRE AHQHLANNGV LIIFPAGEVS TYNKETKLLS DKRWSYSATK
FIQKHNATTV PIYIDGRNSH TFYLAGKIHP LLRTLMLGRE MLNKKENTIN LSIGNPISHK
ELSGFNSPIE TINYLRLNTY LLATNTDQTP QPEVKATALS PIMPAINADI LEKEIHGLPE
SAKLLEQSGL AVYCTKSQFI PAVIQEIGRI REVTFRDVGE GTGLSCDLDE YDTHYYHLFI
WHQENKEIVG SYRLGLVDEL IEEFGLDGLY SRSLFNYQQP FINTLHNSIE VGRSVVAKKY
QRNVSSLLLL WKGISTFVYQ RPQYTHLFGP VSISNDYSLS ARQLIASTLT IHHYDNEKAA
LVSATTPLKP IIKKVWNGDM LSLLGDLKLL SKVLSRIEKG KGLPVLLRQY IGLNGKLICF
NVDPDFNDAL DGLIVVDMSN VPHKTLSKYM GKEEAMCYLE KHNRNNIHSK
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