Gene VSAL_I0400 details

Gene Information

• Locus tag: VSAL_I0400
• ID: 6988431
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 438149
• End bp: 438847
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643378776
• Product: hypothetical protein
• Protein accession: YP_002261929
• Protein GI: 209694001

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.458276
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAAT TATCCCTCAC CACTGTTGTT GCTTCTGTTG TCTTAGTATT GGCAGTACCT 
GCACATTCAG CAGAGAAGGA GTTTACGACT AAAATTGCTA TTGATGCGTG GTTCCCTGAT 
GGAAAGGTTG GCTCTAAAGA TAATGCCGTT CGTGATAATG ATGTTGATGC ATCACAAGCG 
TTTTCTATTG CATTTGAACA TCCATACCCA ATTTTACCAA ATGTAAAAGT ACGTTATACC 
CCTGTGAAAG CAGATCGTTT TGAATATGAT CAAATCGATT ATACGGGTTA CTATAAATTA 
TTAGACACTA ACGGTCTTCA GTTTGATGTA GGTTTGACCT TAACGCAGTT TGCCAATGGT 
GAATTCAATA AAGGTGGCTC TGTTGATTCA ACGCAACCAC ACGATCAAAG CTTTAGTGAA 
ACGGCGATGA ACATGTACGC GGATGCGTCA CTGCATATTC CAAATACAAA CTTCCATATT 
TTTGGTCAGT ATGATTTTGG TAGCAGCAGC GATACTCGAA CAATGGATGG TCAAGCAGGG 
GTTAAGTACA TTCTTCCTGT TGATGAAACC GTTGATGTTG AATTCAAGCT GGGTTATCGA 
GTTATGGATC ATGAGTTTGG TTACTTTGAA GGTTTTGATA GCGACCAAGC AAACGTCATG 
GTAGATGGCT GGTTCGGCGG TTTGTCATTT GATTTCTAA 

 

Protein sequence

MNKLSLTTVV ASVVLVLAVP AHSAEKEFTT KIAIDAWFPD GKVGSKDNAV RDNDVDASQA 
FSIAFEHPYP ILPNVKVRYT PVKADRFEYD QIDYTGYYKL LDTNGLQFDV GLTLTQFANG 
EFNKGGSVDS TQPHDQSFSE TAMNMYADAS LHIPNTNFHI FGQYDFGSSS DTRTMDGQAG 
VKYILPVDET VDVEFKLGYR VMDHEFGYFE GFDSDQANVM VDGWFGGLSF DF