Gene VSAL_I0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0397 
Symbol 
ID6986464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp434540 
End bp435601 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content33% 
IMG OID643378773 
Productshufflon-specific DNA recombinase 
Protein accessionYP_002261926 
Protein GI209693998 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.759416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAA AAACGATTGA AACTGTTAAA CGTAAAAACG GCACTAGCTA TAAAGCTCGT 
GTCCGTCTAA CGTCATACGG TAAAACAATC GCTGAATATT GCCAGTGTTT TAATTTATAT
ATAGATGCAA AAAAGTGGTC AGAGAAAATA GCTAAGGAAG CCGATTCGAA AGGAGCTACT
TGGTTAAACG CTCAAAAAAA CCCAAAGAAA ATTTTAATCT CTGACGTACT GTTGATGGTT
CTAACAAGGT CTCCTACAGC AGAGAATTTA AAAAAATCTA AACGTTCAAA CTTAAAAAAA
TTACAATCTT ATCCTATAGC AAAAATTCCT CTAACTTCTT TAACTGCAAA ACATTTGTTT
GAACATTGTG TACTTAGATG TCAAACAGTG AAACCTCAGA CTGTAGCTCA TGATCTATCC
AATCTTTCTA CTGCATTAAA AGATGCAAGT GTTTTTTTCG ATTTACCTTT TGATTCGTCT
GTATTTACAA ATGCGTACTC TTCATTACAG CGCCACGGTT TTATTGCCCG TAGTGATATT
AGAACACGTC GTCCAAATAA AAATGAATTA AAACTTATTA TCGATGAGCT TAGCTTGAAC
AGAAAAAATT ATTTATTACA TATTTTTGAA TTAACTCTTG AGACTGCGTT ACGACGTGGA
GAAATAACAA AACTTCGCTG GCAAGATTTT AATTTAAAAA ACAAAACATT AACCGTTAGA
GGCCGTAAGC ATCCTTGTAA TTCAAAACGG CAAACAACAA CTATTCCTTT AAGTAAAAAA
GCGGTAGAAA TCCTAATTAA AATCCCAAAA AACATTGAAT CTGACTTAAT TTTTACAATT
AAATCAGCCT CAATTAGTAC GAATTGGCGC AAGTTAATGA AGAAGTTAAA GATCAAAGAC
CTTCATTTTC ATGATCTTCG AGCGGAAGCT GCTTGCCGCT TTTTCGAGCT TGGGCTTACA
CCAGTTGAAA TAGCTAAAAT TACTGGACAT AGAGATATAA ATATTTTGAT GAATATATAT
TTACGACTAA AAGTATCTCC AGAGAGACTT CTAGTTGCTT AG
 
Protein sequence
MATKTIETVK RKNGTSYKAR VRLTSYGKTI AEYCQCFNLY IDAKKWSEKI AKEADSKGAT 
WLNAQKNPKK ILISDVLLMV LTRSPTAENL KKSKRSNLKK LQSYPIAKIP LTSLTAKHLF
EHCVLRCQTV KPQTVAHDLS NLSTALKDAS VFFDLPFDSS VFTNAYSSLQ RHGFIARSDI
RTRRPNKNEL KLIIDELSLN RKNYLLHIFE LTLETALRRG EITKLRWQDF NLKNKTLTVR
GRKHPCNSKR QTTTIPLSKK AVEILIKIPK NIESDLIFTI KSASISTNWR KLMKKLKIKD
LHFHDLRAEA ACRFFELGLT PVEIAKITGH RDINILMNIY LRLKVSPERL LVA