Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0397 |
Symbol | |
ID | 6986464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 434540 |
End bp | 435601 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643378773 |
Product | shufflon-specific DNA recombinase |
Protein accession | YP_002261926 |
Protein GI | 209693998 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.759416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAA AAACGATTGA AACTGTTAAA CGTAAAAACG GCACTAGCTA TAAAGCTCGT GTCCGTCTAA CGTCATACGG TAAAACAATC GCTGAATATT GCCAGTGTTT TAATTTATAT ATAGATGCAA AAAAGTGGTC AGAGAAAATA GCTAAGGAAG CCGATTCGAA AGGAGCTACT TGGTTAAACG CTCAAAAAAA CCCAAAGAAA ATTTTAATCT CTGACGTACT GTTGATGGTT CTAACAAGGT CTCCTACAGC AGAGAATTTA AAAAAATCTA AACGTTCAAA CTTAAAAAAA TTACAATCTT ATCCTATAGC AAAAATTCCT CTAACTTCTT TAACTGCAAA ACATTTGTTT GAACATTGTG TACTTAGATG TCAAACAGTG AAACCTCAGA CTGTAGCTCA TGATCTATCC AATCTTTCTA CTGCATTAAA AGATGCAAGT GTTTTTTTCG ATTTACCTTT TGATTCGTCT GTATTTACAA ATGCGTACTC TTCATTACAG CGCCACGGTT TTATTGCCCG TAGTGATATT AGAACACGTC GTCCAAATAA AAATGAATTA AAACTTATTA TCGATGAGCT TAGCTTGAAC AGAAAAAATT ATTTATTACA TATTTTTGAA TTAACTCTTG AGACTGCGTT ACGACGTGGA GAAATAACAA AACTTCGCTG GCAAGATTTT AATTTAAAAA ACAAAACATT AACCGTTAGA GGCCGTAAGC ATCCTTGTAA TTCAAAACGG CAAACAACAA CTATTCCTTT AAGTAAAAAA GCGGTAGAAA TCCTAATTAA AATCCCAAAA AACATTGAAT CTGACTTAAT TTTTACAATT AAATCAGCCT CAATTAGTAC GAATTGGCGC AAGTTAATGA AGAAGTTAAA GATCAAAGAC CTTCATTTTC ATGATCTTCG AGCGGAAGCT GCTTGCCGCT TTTTCGAGCT TGGGCTTACA CCAGTTGAAA TAGCTAAAAT TACTGGACAT AGAGATATAA ATATTTTGAT GAATATATAT TTACGACTAA AAGTATCTCC AGAGAGACTT CTAGTTGCTT AG
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Protein sequence | MATKTIETVK RKNGTSYKAR VRLTSYGKTI AEYCQCFNLY IDAKKWSEKI AKEADSKGAT WLNAQKNPKK ILISDVLLMV LTRSPTAENL KKSKRSNLKK LQSYPIAKIP LTSLTAKHLF EHCVLRCQTV KPQTVAHDLS NLSTALKDAS VFFDLPFDSS VFTNAYSSLQ RHGFIARSDI RTRRPNKNEL KLIIDELSLN RKNYLLHIFE LTLETALRRG EITKLRWQDF NLKNKTLTVR GRKHPCNSKR QTTTIPLSKK AVEILIKIPK NIESDLIFTI KSASISTNWR KLMKKLKIKD LHFHDLRAEA ACRFFELGLT PVEIAKITGH RDINILMNIY LRLKVSPERL LVA
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