| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0379 |
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| Symbol | |
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| ID | 6986450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 415681 |
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| End bp | 417000 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643378756 |
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| Product | hypothetical protein |
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| Protein accession | YP_002261909 |
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| Protein GI | 209693981 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA CTAAAAAACT GCTCTTTTTT CCTGTGGTGG CTATCGGTGT CATTATCTTG
GTGACCATCA CAAAATTACG GCCTGAGGCC GAAGTTAAGC CCGTTGAAGA TCGTTCAAAA
ATAGTGAAGA CCATTGCTTT AGAGCAACAA AGTATTGCGC CTAAAGTGAT TGGATTCGGT
AAAATAAGGC CTAAATTTGA ATGGAAAGCC ATTGCTGAAG TCTCGGGTAA AGTAGTCTAT
CGCCATCCCG AATTAAATAA AGGCAATGTG TTACTTGCTG GGACTGAGGT ATTGAGGATT
GATCCACTCG ATTACGAATT AAAGCTTGCT CAAGCAGAGG CGGATTTAGG GTCAAGTGAA
ACCCAATTAG CAAAAGTGGA TCTAGAAGAA AAGAACATTC GTAACACATT AAAAATTGAA
AAAAATCGCT TGGCGATCAG CAAAAAAGAA TTAAGTAGAA AAGTAAATTT ACAGAAAAAA
GGCTTAACGT CTCAATCGGA TCTTGATCAG CAAAATCAAT CTTATTTAGC ACAACAAAAA
GTCGTGCTGG ATATTCAAAA CCAAATTTTA TTATTGCCTG ATGAAAGAAA AGTCGCTCAA
GCCATTGTTA AAGTGAACCA AGCTAAATTA AAAGAAGCAC AGCGCTCTTT AGATAAAACG
TCAATTGTAT TACCAACCGA TGTTCGTATT TCTGAAGTGG ACATTGAAGC TGACCAAGTG
GTGAATTTAC AGCAAGAAAT TTTTATTGCT CATGGTATTA AAACTATGGA AGTGGAAGCT
CAAGTTTCTA TTCATGATAT GCAAACGTTA GTGCACAGTT TTGGTATGTT TCAATCGAAT
GAACAAGGTA TGCCTAATCT TGATTCATTG CCGCTAAAAG CAAACGTACA ATTAAGCAGT
GGGCGTTTTA ATGCAGAGTG GCAAGCTCAG GTTGCTCGGA TCAGTGAAAC GGTCGATCCC
AATCAAGCAA CCGTTGGCAT TATTTTAGAG ATACAACAAG ACTACCGTTC ATTAACACCC
AGCACATTAC CTCCATTGGT CAATGGTATG TTTGTAAAAG CAGAAATTGA AGGCGAGGTT
TCACCACAAT GGGTGATCCC TGAAAGTGCA CTTCATGGTG ATAAGATCTA CCTACTTAAT
AATGACAGCC AGTTAACTAT TTTACCCGTA AATATTGTGT TTAGAAGAGA CAATCAAGTC
GCTATTGTCG GGGATATAAC GTCGGGTGAC TTGTTGATCT TAAATGATCT CCTTCCTGCT
ATTAACGGCA TGCAATTGCG TTCTGTTGAG CAAAGAAAGG AAGGGGAGTC GGCTGAATGA
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| Protein sequence | MKITKKLLFF PVVAIGVIIL VTITKLRPEA EVKPVEDRSK IVKTIALEQQ SIAPKVIGFG
KIRPKFEWKA IAEVSGKVVY RHPELNKGNV LLAGTEVLRI DPLDYELKLA QAEADLGSSE
TQLAKVDLEE KNIRNTLKIE KNRLAISKKE LSRKVNLQKK GLTSQSDLDQ QNQSYLAQQK
VVLDIQNQIL LLPDERKVAQ AIVKVNQAKL KEAQRSLDKT SIVLPTDVRI SEVDIEADQV
VNLQQEIFIA HGIKTMEVEA QVSIHDMQTL VHSFGMFQSN EQGMPNLDSL PLKANVQLSS
GRFNAEWQAQ VARISETVDP NQATVGIILE IQQDYRSLTP STLPPLVNGM FVKAEIEGEV
SPQWVIPESA LHGDKIYLLN NDSQLTILPV NIVFRRDNQV AIVGDITSGD LLILNDLLPA
INGMQLRSVE QRKEGESAE
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