| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0377 |
|---|
| Symbol | leuA |
|---|
| ID | 6988744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 413018 |
|---|
| End bp | 414565 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643378755 |
|---|
| Product | 2-isopropylmalate synthase |
|---|
| Protein accession | YP_002261908 |
|---|
| Protein GI | 209693980 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC AAGTCATAAT ATTCGACACC ACCTTAAGAG ATGGCGAGCA AGCACTGTCT
GCAAGCTTAA CCGTAAAAGA AAAATTGCAG ATTGCGTTTG CGCTTGAGCG TCTTGGTGTT
GATGTCATTG AAGCTGGCTT TCCAATTTCA TCGCCAGGTG ATTTTGAGTC GGTACGAACC
ATAGCAAAAC ACATCAAAAA CAGTCGTATT TGTGCCCTTT CTCGTGCGGT TACTAAAGAT
ATCGATGTCG CAGCTGACGC ATTAAAAGTC GCAGAAGCGT TTCGAATTCA CACCTTCATT
TCAACCTCAA CGGTTCACGT TCAAGATAAG TTACGTCGTA GTTATGATGA CGTAGTAGAA
ATGGGCGTCA AAGCCGTTCA GCGTGCTCGT AAATACACCG ATGATGTTGA ATTTTCTTGT
GAAGATGCAG GCCGTACTCC TATTGATAAC CTATGTCGTA TGGTAGAAGC CGCGATCAAC
GCAGGTGCAA ATACCATCAA TATTCCAGAT ACGGTGGGTT ACACCATTCC TGGTGAATTT
GGCGGTATTA TTCAAACCCT ATTTAATCGA GTTCCAAATA TTGATAAAGC CATCATCTCA
GTTCACTGTC ATGATGATTT AGGTATGTCA GTTGCAAACT CAATTGCGGC GGTTCAAGCA
GGTGCTCGCC AAGTTGAAGG CACGATTAAT GGTATTGGTG AGCGTGCAGG TAACTGTTCT
CTAGAAGAAA TTGCAATGAT TTTGCAAACT CGTTCAGAGT ATCTAGGTGT TCATACTAGT
CTTAAAAATG ATGAAATCCA TCGCACCAGT AAGCTAGTTA GTCAGCTTTG TAATATGCCA
ATTCAAAGTA ATAAGGCTAT TGTAGGCGCG AACGCGTTTA GCCACTCTTC AGGCATCCAC
CAAGACGGAA TGCTTAAGAA TAAAAACACT TATGAAATCA TGACGCCAGA ATCTATTGGC
TTAAAAAACA AAGCGTTAAA CCTAACCAGT CGTTCTGGCC GTGCCGCAGT TAAAAGTCAC
ATGGATTCGA TGGGTTATAA AGCCGAAGAA TATAATCTAG ATACCTTGTA TGCCGATTTC
GTAAAACTGG CCGACCGTAA GGGCCAAGTA TTTGATTACG ATTTAGAAGC CCTAATGCAC
TTTGCTAATC TTCGCGATGA AGACGACTTT TATAAGTTGA ACTACTTGAG CGTGCAATCT
GGCAGCGTCA TGGCAACCAC CAGTATCAAA TTGCTTTGTG GCGACGAAGA AAAATGTGAA
GCCGCTGTCG GTAACGGTCC AGTAGATGCC CTTTATCAAT GTATTTATAA GCTAACCGGT
TATGAAATTG TACTGGATAA GTTTGACCTA ACAGCGAAAG GCGAAGGCGA GGACGGGTTA
GGTCAAGCCG ATATCATTGC AAATTACAAA GGCCGCAAGT ACCACGGCAC AGGCTTAGCT
ACCGATATTA TTGAAGCATC AGGCCAAGCA CTGCTTCACG TCATTAATAG CATTCACCGT
GCTGATCAAA TTGCAGAAAT TAAGCAAAAT AAAATTACGA CGGTATAG
|
|---|
| Protein sequence | MSDQVIIFDT TLRDGEQALS ASLTVKEKLQ IAFALERLGV DVIEAGFPIS SPGDFESVRT
IAKHIKNSRI CALSRAVTKD IDVAADALKV AEAFRIHTFI STSTVHVQDK LRRSYDDVVE
MGVKAVQRAR KYTDDVEFSC EDAGRTPIDN LCRMVEAAIN AGANTINIPD TVGYTIPGEF
GGIIQTLFNR VPNIDKAIIS VHCHDDLGMS VANSIAAVQA GARQVEGTIN GIGERAGNCS
LEEIAMILQT RSEYLGVHTS LKNDEIHRTS KLVSQLCNMP IQSNKAIVGA NAFSHSSGIH
QDGMLKNKNT YEIMTPESIG LKNKALNLTS RSGRAAVKSH MDSMGYKAEE YNLDTLYADF
VKLADRKGQV FDYDLEALMH FANLRDEDDF YKLNYLSVQS GSVMATTSIK LLCGDEEKCE
AAVGNGPVDA LYQCIYKLTG YEIVLDKFDL TAKGEGEDGL GQADIIANYK GRKYHGTGLA
TDIIEASGQA LLHVINSIHR ADQIAEIKQN KITTV
|
|---|
| |