| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0366 |
|---|
| Symbol | folA |
|---|
| ID | 6986448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 400556 |
|---|
| End bp | 401077 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643378744 |
|---|
| Product | dihydrofolate reductase type 3 |
|---|
| Protein accession | YP_002261897 |
|---|
| Protein GI | 209693969 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTA GTATGATTGC TGCCATGGCA AATAATGGGA AAATAGATAA ATCGTGCAAT
CTGTCAAATT CTCAATCTCG AATTATTGGC AAAAATAATC AAATGCCATG GCATTTACCT
GCTGATTTTG CATGGTTTAA GCAATGTACT ATGGGAAAGC CAATTGTGAT GGGGCGTAAA
ACCTATGAAT CCATTGGTCG TCCATTACCG GGACGCTTAA ATATTGTATT AAGCCGTGAT
GCGAGTTTGA AGATTGAAGG TGTCACTTGT GTGACTTCAA TTGATGAAGC GAAGCAAGTC
GCCGGTGATA TTGAAGAACT AATGATTATT GGTGGTGGCT CTATCTATCA AGCGTGTTTA
CCTGATGCTG ATACTCTTTA TCTTACCTTT ATTGATGCTG ATATTGATGG AGATACTCAA
TTCCCTGATT GGGGAGAGGG GTGGAACCAG ACGCATTCTG AGATGTATTT GAAAGATGAA
AAGAATCAGT ACGATATGGA ATTTGTAGTG TTAGAAAGGT AA
|
|---|
| Protein sequence | MKISMIAAMA NNGKIDKSCN LSNSQSRIIG KNNQMPWHLP ADFAWFKQCT MGKPIVMGRK
TYESIGRPLP GRLNIVLSRD ASLKIEGVTC VTSIDEAKQV AGDIEELMII GGGSIYQACL
PDADTLYLTF IDADIDGDTQ FPDWGEGWNQ THSEMYLKDE KNQYDMEFVV LER
|
|---|
| |