| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0360 |
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| Symbol | ispB |
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| ID | 6988780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 395817 |
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| End bp | 396788 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643378738 |
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| Product | octaprenyl-diphosphate synthase |
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| Protein accession | YP_002261891 |
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| Protein GI | 209693963 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00089716 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTA AAGCTATCCA AGCCCTCACG GCTGATGACA TGGCAATCGT AAATGAAACC
ATCTTGGCAC AACTAAATTC TGATGTTGCG CTTATCAACC AACTTGGTTT TTACATTGTA
AGTGGAGGCG GTAAACGTCT GCGCCCAGTT CTTGCCATTT TATCTGCAAA AGCACTTGGA
TACGAAGGTA AAGACCACAC AATGGCAGCC GCCTTTATTG AATTTATTCA TACGGCAACA
TTACTTCATG ATGATGTTGT TGATGAATCA GATATGCGTC GTGGTAAAGC CACAGCGAAT
GCTGAATTTG GTAATGCTGC TAGTGTACTT GTTGGTGACT TTATCTACAC TCGTTCATTC
CAAATGATGA CGAGCTTAGG ATCAATAAAG ATCCTGAGTT TAATGAGTGA ATCCGTCAAT
GTGATCGCAG AAGGTGAAGT GCTTCAATTA ATGAACTGCA ATGATCCTAA TACAACTGAA
GAAAGCTACA TGCAAGTGAT CTATTCTAAG ACTGCACGTT TATTTGAAGC TGCGACGCAG
ATCGGCGCGA TCCTAAATAA TGCGTCACAA GAAATCGAAA CGGCTTTACA GAATTACGGT
AAATATCTTG GTACCGCTTT TCAACTTATC GATGATGTCA TGGATTACAC CTCTGACGGC
GAAGACATGG GTAAAAACGT TGGCGATGAT CTCGCAGAAG GCAAACCAAC ACTTCCTTTA
TTACATGCCA TGAACAACGG TAACGCTGAG CAAGCAGCAA TGATCCGTCA TGCTATAGAG
CAAGGTAATG GACTGGATAA ACTCGATCCT ATTTTAGCCT GTATGAAAGA AGTGGGTTCA
CTAGAATATA CAAAACAAAA AGCAGATGAA GAAGCGGACA AAGCAATCGC TGAACTTTCT
ATCATTCCTG AATCTGAATA CAAAGAAGCA TTAAAAGCAC TTGCTCATCT TGCTGTTAAA
CGCAGCAAAT AA
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| Protein sequence | MDFKAIQALT ADDMAIVNET ILAQLNSDVA LINQLGFYIV SGGGKRLRPV LAILSAKALG
YEGKDHTMAA AFIEFIHTAT LLHDDVVDES DMRRGKATAN AEFGNAASVL VGDFIYTRSF
QMMTSLGSIK ILSLMSESVN VIAEGEVLQL MNCNDPNTTE ESYMQVIYSK TARLFEAATQ
IGAILNNASQ EIETALQNYG KYLGTAFQLI DDVMDYTSDG EDMGKNVGDD LAEGKPTLPL
LHAMNNGNAE QAAMIRHAIE QGNGLDKLDP ILACMKEVGS LEYTKQKADE EADKAIAELS
IIPESEYKEA LKALAHLAVK RSK
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