| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0354 |
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| Symbol | uspF |
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| ID | 6989108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 388002 |
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| End bp | 388439 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643378733 |
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| Product | universal stress protein F |
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| Protein accession | YP_002261886 |
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| Protein GI | 209693958 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATAAAC AAATTTTGGT TCCAGTAGAT TTAAACGATA AAGGCTTTGC TGATAAAGCG
GTTGAAATGG CAGTTTGGCA CGCAAAACAC TCTAATGCTG AATTACATTT GCTTAACGTA
TTACCGGGGA TCCATATGTC GATGGTATCG ACCTATTTTC CTAAAGGTGC TGCGAAACAA
ATGAAAGAAG ATGTATCAAA ACAGTTAAAT GAATTTGCGG CTAAATTTGT GGATGATGAT
GTGGTATACA GAGTGCATGT TGCCGAAGGG AAACCTTATG TCACTATTTT AGATTATGCT
GAACGTTTAG GTGCCGATTT GATTGTGATG CCAAGCCATA AACGCTCTAA AATTGATAAA
GTTATGCTGG GTTCTGTGGC GAGTAAAGTT GTCGAAAACT CACCAATTAA CGTGATGGTT
GTCAAACCTC AAGGTTAA
|
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| Protein sequence | MYKQILVPVD LNDKGFADKA VEMAVWHAKH SNAELHLLNV LPGIHMSMVS TYFPKGAAKQ
MKEDVSKQLN EFAAKFVDDD VVYRVHVAEG KPYVTILDYA ERLGADLIVM PSHKRSKIDK
VMLGSVASKV VENSPINVMV VKPQG
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