Gene VSAL_I0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0349 
SymboltbpA 
ID6988093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp380696 
End bp381712 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content39% 
IMG OID643378728 
Productthiamine transporter substrate binding subunit 
Protein accessionYP_002261881 
Protein GI209693953 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4143] ABC-type thiamine transport system, periplasmic component 
TIGRFAM ID[TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.741345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAC GTTATATATC CCCTCTACTT AAAACACTAC CTATCGCTTT AGCTGTTAGT 
TCTCTCTCTT CTTTTTCTGC TTCTGCTTCT GAAACGCTAA CAGTCTATAC TTATGATTCT
TTTGCTGCTG ATTGGGGCCC TGGTCCAACA ATTAAAGCGG CTTTTGAAAA ACAGTGTGGC
TGCAATCTTG ATCTTGTCGC TTTGGATGAT GGCGTTTCTA TTTTGAATCG TCTTCGTTTA
GAAGGCAGTA ATTCAAAAGC GGACATTGTT TTAGGGCTCG ATAATAATTT AATGGCAGAG
GCGAAAGTAA CGGGTTTACT GGCTGAACAT AATGTAAATA CGGACTCAGT GACAATACCT
AATGGTTGGA ATGATAAGAC CTTTGTTCCT TATGATTATG GTTATTTTGC TTTCGTATAT
AACAAAGAAA AAGTAAAGAA CCCACCTAAG AGTCTAAAAG AATTAGTAGA ACAACGAGAT
GATTTAACCG TTATTTATCA AGATCCAAGA ACCTCTACAC CGGGCCAAGG TTTATTGTTA
TGGATGAAAT CGGTGTATGG AGATGATGTT GCTCAAGCAT GGAAACAACT TGCAAAGAAA
ACCGTCACCG TCACGAAAGG CTGGTCAGAA GCTTACAGTA TGTTTTTAGA GGGTGAATCT
GATCTTGTTT TGTCTTATAC GACGTCTCCA GCATACCATT CACTTGCTGA AAAAGACGAT
CGATTTGCAG CGGCTAATTT TTCAGAAGGT CATTACATGC AAGTGGAAGT GGCGGCGAAA
GTAAAAAATA CGCAACATAA TGCGTTAACT GATGAGTTCT TAGCTTTTAT TCTTAGTAAG
GAATTTCAAT CAGCGATGCC AACGGGAAAT TGGATGTATC CAGTGACTAA TATTACGTTA
CCTAAAGGGT TTGAAGACCT TAAGGTTCCG ACTAAAGCGT TGTCATTTAG TTCTGCGGAG
ATTGCGAAAC AAAGAAAGTT GTGGATTCGC GAATGGCAAC ACGCATTAAT CTTTTAA
 
Protein sequence
MKTRYISPLL KTLPIALAVS SLSSFSASAS ETLTVYTYDS FAADWGPGPT IKAAFEKQCG 
CNLDLVALDD GVSILNRLRL EGSNSKADIV LGLDNNLMAE AKVTGLLAEH NVNTDSVTIP
NGWNDKTFVP YDYGYFAFVY NKEKVKNPPK SLKELVEQRD DLTVIYQDPR TSTPGQGLLL
WMKSVYGDDV AQAWKQLAKK TVTVTKGWSE AYSMFLEGES DLVLSYTTSP AYHSLAEKDD
RFAAANFSEG HYMQVEVAAK VKNTQHNALT DEFLAFILSK EFQSAMPTGN WMYPVTNITL
PKGFEDLKVP TKALSFSSAE IAKQRKLWIR EWQHALIF