Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0349 |
Symbol | tbpA |
ID | 6988093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 380696 |
End bp | 381712 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643378728 |
Product | thiamine transporter substrate binding subunit |
Protein accession | YP_002261881 |
Protein GI | 209693953 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily [TIGR01276] thiamine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.741345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAC GTTATATATC CCCTCTACTT AAAACACTAC CTATCGCTTT AGCTGTTAGT TCTCTCTCTT CTTTTTCTGC TTCTGCTTCT GAAACGCTAA CAGTCTATAC TTATGATTCT TTTGCTGCTG ATTGGGGCCC TGGTCCAACA ATTAAAGCGG CTTTTGAAAA ACAGTGTGGC TGCAATCTTG ATCTTGTCGC TTTGGATGAT GGCGTTTCTA TTTTGAATCG TCTTCGTTTA GAAGGCAGTA ATTCAAAAGC GGACATTGTT TTAGGGCTCG ATAATAATTT AATGGCAGAG GCGAAAGTAA CGGGTTTACT GGCTGAACAT AATGTAAATA CGGACTCAGT GACAATACCT AATGGTTGGA ATGATAAGAC CTTTGTTCCT TATGATTATG GTTATTTTGC TTTCGTATAT AACAAAGAAA AAGTAAAGAA CCCACCTAAG AGTCTAAAAG AATTAGTAGA ACAACGAGAT GATTTAACCG TTATTTATCA AGATCCAAGA ACCTCTACAC CGGGCCAAGG TTTATTGTTA TGGATGAAAT CGGTGTATGG AGATGATGTT GCTCAAGCAT GGAAACAACT TGCAAAGAAA ACCGTCACCG TCACGAAAGG CTGGTCAGAA GCTTACAGTA TGTTTTTAGA GGGTGAATCT GATCTTGTTT TGTCTTATAC GACGTCTCCA GCATACCATT CACTTGCTGA AAAAGACGAT CGATTTGCAG CGGCTAATTT TTCAGAAGGT CATTACATGC AAGTGGAAGT GGCGGCGAAA GTAAAAAATA CGCAACATAA TGCGTTAACT GATGAGTTCT TAGCTTTTAT TCTTAGTAAG GAATTTCAAT CAGCGATGCC AACGGGAAAT TGGATGTATC CAGTGACTAA TATTACGTTA CCTAAAGGGT TTGAAGACCT TAAGGTTCCG ACTAAAGCGT TGTCATTTAG TTCTGCGGAG ATTGCGAAAC AAAGAAAGTT GTGGATTCGC GAATGGCAAC ACGCATTAAT CTTTTAA
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Protein sequence | MKTRYISPLL KTLPIALAVS SLSSFSASAS ETLTVYTYDS FAADWGPGPT IKAAFEKQCG CNLDLVALDD GVSILNRLRL EGSNSKADIV LGLDNNLMAE AKVTGLLAEH NVNTDSVTIP NGWNDKTFVP YDYGYFAFVY NKEKVKNPPK SLKELVEQRD DLTVIYQDPR TSTPGQGLLL WMKSVYGDDV AQAWKQLAKK TVTVTKGWSE AYSMFLEGES DLVLSYTTSP AYHSLAEKDD RFAAANFSEG HYMQVEVAAK VKNTQHNALT DEFLAFILSK EFQSAMPTGN WMYPVTNITL PKGFEDLKVP TKALSFSSAE IAKQRKLWIR EWQHALIF
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