| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0342 |
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| Symbol | rpsK |
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| ID | 6989200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 374740 |
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| End bp | 375129 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643378720 |
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| Product | 30S ribosomal protein S11 |
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| Protein accession | YP_002261874 |
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| Protein GI | 209693946 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0100] Ribosomal protein S11 |
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| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00110784 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC AACCAACTCG CGCTCGTAAG CGCGTTCGTA AGCAAGTAGC GGATGGCGTA
GCGCATATCC ATGCTTCTTT CAATAATACA ATCGTAACCA TTACTGACCG TCAAGGTAAT
GCACTAGCTT GGGCTACTGC AGGTGGTTCT GGTTTCCGTG GTTCTCGTAA ATCTACTCCG
TTTGCTGCAC AAGTTGCTGC TGAACGTTGT GGTGAAATGG CCAAAGAATA TGGCGTTAAG
AACCTTGAAG TTATGGTTAA GGGCCCTGGT CCTGGTCGTG AGTCAACTAT CCGTGCGTTA
AACGCTGCTG GATACCGCAT CACAAATATT GTTGATGCTA CTCCGATCCC TCATAACGGT
TGTCGTCCAC CTAAGAAACG TCGCGTTTAA
|
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| Protein sequence | MAKQPTRARK RVRKQVADGV AHIHASFNNT IVTITDRQGN ALAWATAGGS GFRGSRKSTP
FAAQVAAERC GEMAKEYGVK NLEVMVKGPG PGRESTIRAL NAAGYRITNI VDATPIPHNG
CRPPKKRRV
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