| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0340 |
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| Symbol | secY |
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| ID | 6989158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 372740 |
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| End bp | 374071 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643378717 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_002261872 |
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| Protein GI | 209693944 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00542322 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA AACCAGGAAA AGAAGTAAAT AGTGCTCAGA GCGGCTTAGC TGAACTGAAA
TCGCGTCTCT TATTTGTGAT AGGTGCGCTT TTAGTGTTCC GTGCGGGCTC ATTTGTGCCA
ATTCCTGGGA TTGACGCTGC TGTCCTTGCT GATCTTTTCG AACAGCAGCA GGGTACCATC
ATTGAAATGT TTAACATGTT CTCTGGTGGT GCACTGTCGC GTGCCTCAAT TCTTGCTCTA
GGTATTATGC CGTATATTTC GGCATCTATC GTTGTGCAAC TGTTAACAGT TGTACATCCT
CCTCTAGCAG AATTGAAAAA AGAAGGTGAG TCTGGTCGTC GTAAGATTAA TCAGTACACA
CGTTATGGCA CCTTGGTTCT GGCGACATTC CAAGCAATTG GGATTTCAAC CGGATTGCCA
AGCATGATTC CAGGGTTAGT TTCTAACCCT GACATGATGT TCTATCTAAC AGCTACAGTA
AGTTTAATTA CCGGTACCAT GTTTTTAATG TGGTTAGGTG AGCAAATTAC TGAACGTGGC
ATCGGTAACG GTATATCTTT GATTATTTTC ACAGGTATCG TTGCAGGTTT ACCACCAGCT
ATTGGTGAAA CGATCCAGCA GGCGCGTCAA GGTGAACTGC ACGTGCTTCT TCTATTACTA
ATTGCAGTGT TATCGTTTGC AGTTATCTAC TTTGTAGTGT TCATGGAGCG TGGTCAACGT
CGTATCGTCG TTAACTATGC AAAACGTCAG CAAGGCCGTA AGGTATTTGC AGCTCAAAGT
ACTCACTTGC CACTTAAAAT TAATATGGCT GGTGTGATTC CTGCAATATT TGCATCTAGT
ATTATACTAT TCCCTGGGAC ATTGGCTCAG TGGTTTGGTG GTAATGGCGA AGGAACATTC
GGTTGGTTAA CTGATGTTTC CATGGCGTTA AGCCCTGGTC AGCCATTATA TGTAATGCTT
TATGCAGCAG CAATTATCTT CTTCTGTTTC TTCTATACCG CGTTGGTTTT TAACCCGCGT
GAAACAGCTG ATAACTTGAA GAAGTCTGGT GCATTCGTAC CCGGAATCCG CCCAGGTGAA
CAGACAACGA AATACATAGA TAAAGTGATG ACACGGTTAA CCCTAGCGGG CGCAATGTAT
ATTACCTTCA TCTGTCTGAT CCCTGAGTTT ATGATGATTG CATGGAACGT ACGCTTCTAT
TTTGGCGGTA CTTCACTACT AATTGTAGTT GTAGTTATTA TGGACTTTAT GGCACAAGTT
CAGACTCATC TGATGTCTCA GCAGTATGAG TCCGTTTTGA AGAAAGCTAA TCTGAAAGGC
TATGGCCGTT AA
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| Protein sequence | MAKKPGKEVN SAQSGLAELK SRLLFVIGAL LVFRAGSFVP IPGIDAAVLA DLFEQQQGTI
IEMFNMFSGG ALSRASILAL GIMPYISASI VVQLLTVVHP PLAELKKEGE SGRRKINQYT
RYGTLVLATF QAIGISTGLP SMIPGLVSNP DMMFYLTATV SLITGTMFLM WLGEQITERG
IGNGISLIIF TGIVAGLPPA IGETIQQARQ GELHVLLLLL IAVLSFAVIY FVVFMERGQR
RIVVNYAKRQ QGRKVFAAQS THLPLKINMA GVIPAIFASS IILFPGTLAQ WFGGNGEGTF
GWLTDVSMAL SPGQPLYVML YAAAIIFFCF FYTALVFNPR ETADNLKKSG AFVPGIRPGE
QTTKYIDKVM TRLTLAGAMY ITFICLIPEF MMIAWNVRFY FGGTSLLIVV VVIMDFMAQV
QTHLMSQQYE SVLKKANLKG YGR
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