Gene VSAL_I0339 details

Gene Information

• Locus tag: VSAL_I0339
• Symbol: rplO
• ID: 6989172
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 372285
• End bp: 372719
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643378716
• Product: 50S ribosomal protein L15
• Protein accession: YP_002261871
• Protein GI: 209693943
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.003773
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTTGA ATACTCTATC ACCGGCTGCT GGATCAAACC CTTCTAAGAA GCGTGTTGGT 
CGTGGTATCG GTTCGGGCCT AGGTAAAACT GGTGGCCGTG GTCATAAAGG CCAAAAATCA 
CGTTCTGGCG GTAAAGTTCG CGTTGGTTTT GAAGGCGGTC AAATGCCTCT GAAACAACGT 
TTACCTAAAT TTGGCTTTAC TTCACGTAAG AGCCTAGTGA CTGCAGAGGT TCGTTTAAGC 
GAACTTGCTA AAGTTGAAGG TAACGTTATC GATCTAAACA GCCTTAAAGC TGCTAACGTA 
ATCACTAAGA ACATTGTGTT CGCGAAAGTT GTACTTTCTG GTGAAATAGC TACTGCTGTA 
ACTGTTAAAG GTCTACGCGT AACGAAAGGC GCTAAAGCTG CGATTGAAGC TGCAGGCGGT 
AAGATCGAGG AATAA 

 

Protein sequence

MRLNTLSPAA GSNPSKKRVG RGIGSGLGKT GGRGHKGQKS RSGGKVRVGF EGGQMPLKQR 
LPKFGFTSRK SLVTAEVRLS ELAKVEGNVI DLNSLKAANV ITKNIVFAKV VLSGEIATAV 
TVKGLRVTKG AKAAIEAAGG KIEE