Gene VSAL_I0321 details

Gene Information

• Locus tag: VSAL_I0321
• Symbol: rplD
• ID: 6989148
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 364528
• End bp: 365130
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643378698
• Product: 50S ribosomal protein L4
• Protein accession: YP_002261853
• Protein GI: 209693925
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0789186
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTAA TGGTTAAAGG TGCTGCGGCA CTAACTGTTT CCGAAACTAC TTTCGGACGT 
GAGTTTAACG AGGCTCTTGT ACACCAAGTA GTTGTTGCGT ATGCAGCAGG TGCTCGTCAA 
GGTACTCGCG CTCAAAAAAC ACGTTCTGAA GTATCTGGCG GTGGCGCTAA GCCATGGCGT 
CAAAAAGGTA CAGGCCGAGC TCGTGCGGGT ACTATTCGTA GCCCAATCTG GCGTTCAGGT 
GGTGTTACTT TCGCTGCGAA ACCACAAGAT CACAGCTTGA AAGTAAACAA AAAAATGTAC 
CGTGGTGCTC TTAAAAGCAT TCTTTCTGAG TTAGTTCGTC AAGATCGTTT GATCGTTGTT 
GAAGACTTCT CAATTGAAGC ACCAAAAACT AAAGAGCTAG TTGCTAAGCT TAAAGAACTT 
GAGCTTAACG ATGTTCTTAT CGTAACTGGC GAAGTAGACG AGAATCTATT CTTAGCTGCT 
CGTAACCTAT ATAAAGTTGA CGCACGTGAC GTTGCTGGTA TTGATCCAGT AAGTCTTGTT 
GCATTCAACA AGGTTCTAAT GACTGCTGCT GCAGTTAAGC AAGTTGAGGA GATGCTGGCA 
TGA 

 

Protein sequence

MELMVKGAAA LTVSETTFGR EFNEALVHQV VVAYAAGARQ GTRAQKTRSE VSGGGAKPWR 
QKGTGRARAG TIRSPIWRSG GVTFAAKPQD HSLKVNKKMY RGALKSILSE LVRQDRLIVV 
EDFSIEAPKT KELVAKLKEL ELNDVLIVTG EVDENLFLAA RNLYKVDARD VAGIDPVSLV 
AFNKVLMTAA AVKQVEEMLA