Gene VSAL_I0311 details

Gene Information

• Locus tag: VSAL_I0311
• Symbol: rpsG
• ID: 6989199
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 354263
• End bp: 354733
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643378690
• Product: 30S ribosomal protein S7
• Protein accession: YP_002261845
• Protein GI: 209693917
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0049] Ribosomal protein S7
• TIGRFAM ID: [TIGR01029] ribosomal protein S7, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00398327
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACGTC GTCGCGTAAT AGGCCAACGT AAGATCCTTC CAGATCCTAA GTTCAAATCT 
GAACTGTTGG CAAAATTTGT AAACATCGTA ATGGTTGACG GTAAGAAATC AACTGCTGAA 
AAAATCGTTT ACGGTGCACT AGAATTAATG GCTGAGAAAT CTGGTAAAGA TCACTTAGCT 
GTATTCGAAG AAGCTCTTGA AAACATTCGT CCATCGGTAG AAGTTAAATC TCGCCGTGTG 
GGTGGTTCAA CTTACCAAGT TCCTGTAGAA GTACGTCCGG TTCGCCGTAA CGCACTTGCT 
ATGCGTTGGT TAGTTGAAGC TGCGCGTAAG CGTGGTGAAA AATCTATGGC TCAACGTCTT 
GCTAACGAAA TGTTAGACGC GTCTGAGAAC AAAGGTACTT CGGTTAAGAA ACGTGAAGAC 
GTTCACCGTA TGGCTGATGC TAACAAAGCG TTTGCTCATT ACCGCTGGTA A 

 

Protein sequence

MPRRRVIGQR KILPDPKFKS ELLAKFVNIV MVDGKKSTAE KIVYGALELM AEKSGKDHLA 
VFEEALENIR PSVEVKSRRV GGSTYQVPVE VRPVRRNALA MRWLVEAARK RGEKSMAQRL 
ANEMLDASEN KGTSVKKRED VHRMADANKA FAHYRW