Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0296 |
Symbol | |
ID | 6986429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 342530 |
End bp | 343498 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643378675 |
Product | putative hydrolase |
Protein accession | YP_002261830 |
Protein GI | 209693902 |
COG category | [R] General function prediction only |
COG ID | [COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGATC AATTTACGCC AATAACCGGG TTATCAAACG CCCATATTCA AACCTTATTA CCGCGATTGC TGCGTCGTCA CCCCTTATTT AATGCGTATT GGCAACGACT CGAATTACCC GATGGTGACT TTGTTGATTT AGCCTGGAGC GAAAATCCAA ACACCGCAGG TAACAAACCT CTGTTCATTT TATTTCATGG GTTAGAGGGA AGCTTTGAAA GTCCTTATGC GAATGGATTA TTATCTTCAG CCAAAGAACA AGGTTGGTTA GGGGTAATGA TGCATTTTAG AGGGTGCAGT GACGTACCTA ATCGTTTAGA AAAAGCCTAT CATTCAGGTG AAACCGAAGA CGCTCGTTTC TTCCTAGAAA CCATCCATGA CCGCTTTCCA AATCGAGTCA AAGTGGCTAC TGGCGTTTCT CTTGGCGGCA ATATGTTGGT TAACTACTTA GCAAAATATA ACTCGAATAC ATTACTCAAT GCCGCCACCA TTATTTCCGC ACCTTTAGAT TTATCGGCGT GTTCAGAGCG AATTCAACAA GGATTCTCTC GTGTATACCA AGGGTATTTG TTACGCTCAT TAAAAACCAA TAGCATCAAA AAGTTAAATA GCACAAGAAA ACATATCGTT GGTTTAGACA AAGACATGAT TGCCGCCATT CCTGACTTAC TGCAATTTGA TAATTTAATC ACCGCCCCCC TCAATGACTA TGCCGATGCC CAAGATTATT ATCAGCAATG CAGCGGGTTA CAATTTCTCA ATGACATCAA TATTCCAACA CGGATCATTC ACGCCAAAGA CGATCCTTTT ATGACAACCG CGGTGATCCC TACTCATCCT CTTCCTAACT GTGTACACTA TCAACTCACG GAACATGGGG GCCATGTTGG CTTTATTAAT GGCTCAATGA CCAAACCAAA CTTTTGGCTA GAAGACACCG TAAATCGGTG GTTTCAAACT GTTGTGTAA
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Protein sequence | MMDQFTPITG LSNAHIQTLL PRLLRRHPLF NAYWQRLELP DGDFVDLAWS ENPNTAGNKP LFILFHGLEG SFESPYANGL LSSAKEQGWL GVMMHFRGCS DVPNRLEKAY HSGETEDARF FLETIHDRFP NRVKVATGVS LGGNMLVNYL AKYNSNTLLN AATIISAPLD LSACSERIQQ GFSRVYQGYL LRSLKTNSIK KLNSTRKHIV GLDKDMIAAI PDLLQFDNLI TAPLNDYADA QDYYQQCSGL QFLNDINIPT RIIHAKDDPF MTTAVIPTHP LPNCVHYQLT EHGGHVGFIN GSMTKPNFWL EDTVNRWFQT VV
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