| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0272 |
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| Symbol | |
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| ID | 6986412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 318954 |
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| End bp | 321161 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643378653 |
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| Product | putative outer membrane protein |
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| Protein accession | YP_002261808 |
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| Protein GI | 209693880 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.635582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTATC CTAAATTTGC CTTATCTTTA ATTGCAAGTG CGATTACTGC TACTTTTTCG
ACTTTTTCCT TGGCTGCAGA AAGTAGTGAA TATATTGAAC CAATAACCTT TACCCCTTCC
CAAACTGATT TTGGTGGCGT TGGTTTAATG CAAATGCCTT CAGGACGTAA TGCTGAAGAG
GGGACATTCA GTTTTAATAC TAGCTTCAAT AATGAATATC ACTTTTATAA CCTCTCATTG
CAATTGATGC CGTGGCTTGA AACTACAATC CGTTACACTT TAACTCAAGA CATGAAATAC
AGCAGCGACC CTAGTTTTAG TGGAGATACC ACTCATGCTG ATAAAGGCAT CGATTTCAAG
GTTCGTCTAT TAGAGGAGAG TGACTGGCTA CCTGAAACCT CTATCGGTGT GCGTGATTTT
GGCGGTACTG GTTTATTTGA TGGTGAATTT GTTGCGGCAA CCAAGCGTTT TGGTAATCTC
GATGTCACCG TGGGCATGGG TTGGGGCTAC CTTGGACAAA GTGGCAATAT TACTAATCCA
TTTTGTAAAG CATCGGATAA ATATTGCTCG CGTGAGTCTG ACTTTAAAGG CAATGGCGGC
AGTGTCGATT TTGAGCGTTG GTTTAAAGGC TCTGCGTCAC TCTATGGTGG TTTGGAATAT
CAAACCCCTT TCCAACCGCT GCGCTTAAAA CTTGAATATG ATGGCAATGA TTACAGTCAA
GATTATCCGG TAAAAGGTGG CGTCGCTGAT ATGACTCAGC ACACCCCATG GAACTTTGGT
GTTTTATATG GTTTAGGTGA TTGGGGAGAT ATGCGTTTAA GTTATGAACG AGGGGATACT
CTCACCTTTG GCTTTACGTT AACCACCAAC TTTAACACAA TGAAAGCTAA TTGGCGTGAT
ACCCCTGAAA CCGTGTATCA GGCACCATCA GTTAATCATG TGGATGAAAT AAACTGGAAT
TATATCGAAC AAGAATTAGA TAATAATGCC GGTTATTCTA ACAGTAAATT TTACGTAAAA
GGCAATGAAT TAACGATCGT TACTGGGCAA GAAAAGTATC GTAATAAAGA TATTGCTCAT
CAAGAAGCGG CGGCAATTTT AGCAAGTAAT ACTCCTGAAT ATATTCAAAC TTATCGTATT
ATTGAAGAAA ATAATTCCTT ACTCACCACT GAGACCGTGA TTGATGCTGA ACGTTATAAA
GATGCAGCGC AATTTAATTA CGTGGGCGCT AAAATTACAG ATGCAACCGT CACTCAAGAT
ATCTCTGAGA CTGATTCAAT CAATGATGAT AATTTAAAAC ATGACTCATT TGACCGTTGG
GATGTGAATA TTTCTCCGTC TTTACGTCAA TCAATTGGTG GTGCTGAAGG TTTTTATCTG
TATGAGATAG GCATTAAAGC AGGATCCTCT TATTGGCTTA CTGATAACCT GCAAGCTTCT
GGATCTCTGT ATTTAAACCT TATTGATAAC TATGATAAAT TTAATTACAT CGCACCACCC
GATGCGACCG AGGTTCCTCG TGTTCGTACC ATGTTTAGAG CTTATGCCAC TGAAAGCGCT
TTAAGACTGG AACGTTTACA GCTTACTTGG TTTGATGAAT ATGCTGAAGG TCTATATGGG
CAGACTTATG GTGGTTATTT AGAGAGTATG TTTGGTGGCG TTGGTACTGA GATATTATAC
CGCCCTATAA ATAGCCGCTG GGCTGTTGGC CTTGATTATA CGTACATTCA ACAACGCTCT
CCTGATAATT GGTTTGATTT CTATCAAGAT GACCGTCAAT ACAGCGAAGC CGATGGACGT
TATTACAATG TTCGCTCTCA AGGAACAACT GGCCACTTAA CCGGATATTA CATGCCTCAA
TGGTCATTTT TAAAGAGTAC GCTATTAAAG GTAAGTTATG GTGAGTTTTT AGCAGGCGAT
AAAGGCTATC GTGTAGATTT TTCTAAACAG TTTGATTCAG GTGTTATTGT TGGTGCTTAT
GCAAGTATGA CTGATTTATC TGCGGAGGAA TTTGGTGAAG GCAGTTATAC CAAAGGGTTT
TACCTCTCTA TTCCTTACGA CATCATGACG GTTAAACCAA GTAAAAATAG AGCGTACTTT
GATTGGCAAC CTTTGACTCG TGATGGCGGG CAGATGTTGT CGAAGGAAAA TACGTTGTTT
GGCTTAACAG ATGCAAGACA ACCGTGGTAT ACGAAGAAAG GGCTTTAG
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| Protein sequence | MPYPKFALSL IASAITATFS TFSLAAESSE YIEPITFTPS QTDFGGVGLM QMPSGRNAEE
GTFSFNTSFN NEYHFYNLSL QLMPWLETTI RYTLTQDMKY SSDPSFSGDT THADKGIDFK
VRLLEESDWL PETSIGVRDF GGTGLFDGEF VAATKRFGNL DVTVGMGWGY LGQSGNITNP
FCKASDKYCS RESDFKGNGG SVDFERWFKG SASLYGGLEY QTPFQPLRLK LEYDGNDYSQ
DYPVKGGVAD MTQHTPWNFG VLYGLGDWGD MRLSYERGDT LTFGFTLTTN FNTMKANWRD
TPETVYQAPS VNHVDEINWN YIEQELDNNA GYSNSKFYVK GNELTIVTGQ EKYRNKDIAH
QEAAAILASN TPEYIQTYRI IEENNSLLTT ETVIDAERYK DAAQFNYVGA KITDATVTQD
ISETDSINDD NLKHDSFDRW DVNISPSLRQ SIGGAEGFYL YEIGIKAGSS YWLTDNLQAS
GSLYLNLIDN YDKFNYIAPP DATEVPRVRT MFRAYATESA LRLERLQLTW FDEYAEGLYG
QTYGGYLESM FGGVGTEILY RPINSRWAVG LDYTYIQQRS PDNWFDFYQD DRQYSEADGR
YYNVRSQGTT GHLTGYYMPQ WSFLKSTLLK VSYGEFLAGD KGYRVDFSKQ FDSGVIVGAY
ASMTDLSAEE FGEGSYTKGF YLSIPYDIMT VKPSKNRAYF DWQPLTRDGG QMLSKENTLF
GLTDARQPWY TKKGL
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